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Read and extract images from a DICOM file using GDCM

Project description

mudicom

A python package that validates, reads, and extracts images from a DICOM file.

This python package requires GDCM with the python wrapper

Quick How To

import mudicom
mu = mudicom.load("mudicom/tests/dicoms/ex1.dcm")
# returns array of data elements as dicts
mu.read()
# returns dict of errors and warnings for DICOM
mu.validate()
# creates image object
img = mu.image()
# returns numpy array
img.numpy()
# using Pillow, saves DICOM image
img.save_as_pil("ex1.jpg")
# using matplotlib, saves DICOM image
img.save_as_plt("ex1_2.jpg")

Documentation

Full documentation is available at https://github.com/neurosnap/mudicom

Requirements

  • Python 2.7

  • GDCM with python wrapper

Credits

Written by Eric Bower

Special thanks to Mathieu Malaterre (primary developer for GDCM), of whom without this package would not be possible.

Change Log

v0.0.5, 08-14-2014

Updated MANIFEST.in to include .rst, I’m a dumbass

v0.0.4, 08-14-2014

Removed LICENSE.rst from setup.py

v0.0.3, 08-14-2014

PIP cannot read LICENSE.rst for some reason

v0.0.3, 08-14-2014

Weird permission issues with the egg

v0.0.2, 08-14-2014

Updated packaging description

v0.0.1, 04-04-2014

Initial release.

Project details


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mudicom-0.0.5.tar.gz (12.8 kB view hashes)

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