An multiscale image processing library for the Laboratory of Optical and Computational Instrumentation
Project description
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Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in the
documentation and/or other materials provided with the distribution.
* Neither the name of the Laboratory for Optical and Computational Instrumentation nor the
names of its contributors may be used to endorse or promote products
derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL <COPYRIGHT HOLDER> BE LIABLE FOR ANY
DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Description: [![Build Status](https://travis-ci.org/uw-loci/multiscale.svg?branch=master)](https://travis-ci.org/uw-loci/multiscale)
Multiscale imaging at LOCI
===================
This library holds tools for multiscale imaging projects at the Laboratory of Optical and Computational Instrumentation.
It holds tools for image registration, for interfacing with several toolkits (e.g. CurveAlign), and other processing
tasks based on project.
## Motivation
## Submodules
This project includes several submodules. Each submodule includes a "task_scripts" sub-submodule
with scripts written for specific image analysis pipelines at LOCI
itk: Tools for supervised registration using the SimpleITK toolkit
microscopy: Interfacing with the LOCI program OpenScan and related microscopy files
polarimetry: Processing Mueller Matrix Polarimetry images
ultrasound: Reconstruction and processing of 3D US images from 2D slices
## Code example
## Install
## Usage
## Tests
## How to use?
## Contribute
## Credits
## License
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: BSD License
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in the
documentation and/or other materials provided with the distribution.
* Neither the name of the Laboratory for Optical and Computational Instrumentation nor the
names of its contributors may be used to endorse or promote products
derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL <COPYRIGHT HOLDER> BE LIABLE FOR ANY
DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Description: [![Build Status](https://travis-ci.org/uw-loci/multiscale.svg?branch=master)](https://travis-ci.org/uw-loci/multiscale)
Multiscale imaging at LOCI
===================
This library holds tools for multiscale imaging projects at the Laboratory of Optical and Computational Instrumentation.
It holds tools for image registration, for interfacing with several toolkits (e.g. CurveAlign), and other processing
tasks based on project.
## Motivation
## Submodules
This project includes several submodules. Each submodule includes a "task_scripts" sub-submodule
with scripts written for specific image analysis pipelines at LOCI
itk: Tools for supervised registration using the SimpleITK toolkit
microscopy: Interfacing with the LOCI program OpenScan and related microscopy files
polarimetry: Processing Mueller Matrix Polarimetry images
ultrasound: Reconstruction and processing of 3D US images from 2D slices
## Code example
## Install
## Usage
## Tests
## How to use?
## Contribute
## Credits
## License
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: BSD License
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