Visualize and Diagnose brainbow dataset in color space.
Project description
napari-brainbow-diagnose
Visualize and Diagnose brainbow dataset in color space.
Pitch
Brainbow dataset have unique features that need to be addressed by specialized tools. This plugin aims at visualize and diagnose brainbow dataset. In particular we want to interact with the distribution of the dataset in the channel space.
Dev Installation
conda create -n napari-brainbow-diagnose python=3.9
conda activate napari-brainbow-diagnose
conda install pip
git clone git@github.com:LaboratoryOpticsBiosciences/napari-brainbow-diagnose.git
cd napari-brainbow-diagnose
pip install -e .[testing]
pre-commit install
Do not forget to run pytest pytest .
before you commit to check your code.
Installation
You can install napari-brainbow-diagnose
via pip:
pip install napari-brainbow-diagnose
To install latest development version :
pip install git+https://github.com/LaboratoryOpticsBiosciences/napari-brainbow-diagnose.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-brainbow-diagnose" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Project details
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Source Distribution
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