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A napari plugin for counting cells.

Project description

A napari plugin to count cells using a U-Net for cell identification

Model uses ResNet architecture layers as encoders, and requires custom trained model weights (model trained using resnet50 imagenet1_v1 pretrained weights as starting point)

Current Model works well for DAB stained neuronal cells of 30micron mouse brain sections

Install using: pip install napari_dab_cellcount

Run using: napari napari_dab_cellcount

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