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Segment non-star-convex objects with StarDist by merging masks.

Project description

napari-merge-stardist-masks

License BSD-3 PyPI Python Version tests codecov napari hub

Segment non-star-convex objects with StarDist by merging masks.


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Run

In PowerShell, when you do not have sufficient GPU support, run napari without CUDA support, i.e.,:

$env:CUDA_VISIBLE_DEVICES=-1; napari

Installation

You can install napari-merge-stardist-masks via pip:

pip install napari-merge-stardist-masks

To install latest development version :

pip install git+https://github.com/gatoniel/napari-merge-stardist-masks.git

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the BSD-3 license, "napari-merge-stardist-masks" is free and open source software

Issues

If you encounter any problems, please file an issue along with a detailed description.

Project details


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Source Distribution

napari-merge-stardist-masks-0.0.4.tar.gz (10.2 kB view details)

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