A collection of widgets to process images from start to finish--focused on neural development.
Project description
napari-ndev
A collection of widgets intended to serve any person seeking to process microscopy images from start to finish. The wide breadth of this plugin's scope is only made possible by the amazing libraries and plugins from the napari community.
Docs
https://timmonko.github.io/napari-ndev/
Installation
napari-ndev is a pure Python package, and can be installed with pip:
pip install napari-ndev
You may also like to install napari-aicsimageio
to properly handle metadata with the Image Utilities
widget.
pip install napari-aicsimageio
In addition, you may need to install specific bioio
readers to support your specific image, such as bioio-czi
or bioio-lif
.
This napari plugin was generated with Cookiecutter using napari's cookiecutter-napari-plugin template.
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-ndev" is free and open source software
Issues
If you encounter any problems, please [file an issue] along with a detailed description.
Project details
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