A plugin to automatically count lung organoids
Project description
napari-organoid-counter
A napari plugin to automatically count lung organoids from microscopy imaging data. The original implementation can be found in the Organoid-Counting repository, which has been adapted here to work as a napari plugin.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Installation
You can install napari-organoid-counter via pip:
pip install napari-organoid-counter
To install latest development version :
pip install git+https://github.com/HelmholtzAI-Consultants-Munich/napari-organoid-counter.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the MIT license, "napari-organoid-counter" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
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