Interactive visualization of spatial omics data with napari
Project description
napari-spatialdata
Interactive visualization of spatial omics data with napari
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
UNDER DEVELOPMENT
Clone repo and pip install -e .
.
Run examples e.g. python shape_regions.py
or via notebook for the shape export function.
More documentation on usage will be added later on.
Expect breaking changes.
Installation
You can install napari-spatialdata
via pip:
pip install napari-spatialdata
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-spatialdata" is free and open source software
Issues
If you encounter any problems, please [file an issue] along with a detailed description.
Project details
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