napari-tyssue
A napari plugin for use with the tyssue library
Example video of apoptosis demo simulation created based on the apoptosis demo from tyssue-demo.
Example video of apoptosis demo simulation created based on work under revision by Suzanne group at U Toulouse entitled "Epithelio-mesenchymal transition generates an apico-basal driving force required for tissue remodeling" available here.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Installation
You are better off using conda. You will need pytables, and ideally CGAL.
You can install napari-tyssue via pip:
pip install napari-tyssue
To install latest development version :
pip install git+https://github.com/kephale/napari-tyssue.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-tyssue" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
1 maintainer
Metadata
1 maintainer
Release files for napari-tyssue 0.1.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| napari_tyssue-0.1.3.tar.gz | 20.0 kB | With provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| napari_tyssue-0.1.3-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 44.3 kB
Release files / napari_tyssue-0.1.3.tar.gz
| Download URL | napari_tyssue-0.1.3.tar.gz |
|---|---|
| Size | 20.0 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
3acee965bd20db30986b157fec07710e6a5b66e3a1160a2980666c8a26fea01a
|
|
BLAKE2b-256 checksum How to use checksums |
ccdee71117e88581d451ac7c995e7fb0f6017a98a00a8f9ab638cf7f1b2198e8
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.12
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Jun 7, 2026.
Transparency logRelease files / napari_tyssue-0.1.3-py3-none-any.whl
| Download URL | napari_tyssue-0.1.3-py3-none-any.whl |
|---|---|
| Size | 24.2 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
91816ae81794548354f635f870d7fba2fdf0e3dead3dc2f3e66c8b30147414f6
|
|
BLAKE2b-256 checksum How to use checksums |
b606942475acf11acf2b97d9060b8e229a0a4f691c541ecbe3805d2242431608
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
Yes |
| Uploaded via |
twine/6.1.0 CPython/3.13.12
|
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Jun 7, 2026.
Transparency logSecurity for napari-tyssue 0.1.3
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
Full provenance
All 2 files in this release have been uploaded with provenance metadata.
Attestation for napari_tyssue-0.1.3.tar.gz
PyPI Publish Attestation
PyPI verified that this artifact, at this checksum, originated from the publisher listed below.
Signed by GitHub Actions, verified by PyPI on Jun 7, 2026.
Transparency logA note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
