A napari plugin for use with the tyssue library
Project description
napari-tyssue
A napari plugin for use with the tyssue library
Example video of apoptosis demo simulation created based on the apoptosis demo from tyssue-demo.
Example video of apoptosis demo simulation created based on work under revision by Suzanne group at U Toulouse entitled "Epithelio-mesenchymal transition generates an apico-basal driving force required for tissue remodeling" available here.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
Installation
You are better off using conda. You will need pytables, and ideally CGAL.
You can install napari-tyssue
via pip:
pip install napari-tyssue
To install latest development version :
pip install git+https://github.com/kephale/napari-tyssue.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the BSD-3 license, "napari-tyssue" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for napari_tyssue-0.0.1-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 67308706f5d5e45424f4b99639b7b3d7a9304b030d42b6a78f498d815585ed9e |
|
MD5 | 62d41a1bf5477a13715e4e65b2163fc5 |
|
BLAKE2b-256 | 030f4e182cd5ae12b2129c546b20c120349104f223cfe7aad0b05645ace40965 |