navis 0.3.1

Neuron Analysis and Visualization Library

NAVis is a Python 3 library for Neuron Analysis and Visualization with focus on hierarchical tree-like neuron data.

Features:

• interactive 2D (matplotlib) and 3D (vispy/plotly) plotting of neurons

• virtual neuron surgery: cutting, pruning, rerooting

• clustering methods (e.g. by connectivity or synapse placement)

• R bindings (e.g. for libraries nat, rcatmaid, elmr)

• interfaces with neuprint, Blender 3D and Cytoscape

Check out the Documentation.