Skip to main content
This is a pre-production deployment of Warehouse. Changes made here affect the production instance of PyPI (pypi.python.org).
Help us improve Python packaging - Donate today!

Set of commandline tools for NCMIR

Project Description

ncmirtools

Set of commandline tools for interaction with data hosted internally at NCMIR.

For more information please visit our wiki page:

https://github.com/CRBS/ncmirtools/wiki

Tools

  • mpidir.py – Given a Microscopy product id, this script finds the path on the filesystem
  • projectdir.py – Given a project id, this script finds the path on the filesystem
  • projectsearch.py – Allows caller to search database for projects
  • mpidinfo.py – Queries database and returns information on specific Microscopy Product
  • imagetokiosk.py – Transfers second youngest image file to remote server via scp

Compatibility

  • Should work on Python 2.6, 2.7, 3.3, 3.4, & 3.5 on Linux distributions

Installation

Try one of these:

pip install ncmirtools

python setup.py install

License

See LICENSE.txt

Bugs

Please report them here

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

History

0.4.0 (2017-06-28)

  • Added imagetokiosk.py which transfers second youngest image file to remote server via scp. Issue #16
  • Fixed a couple minor issues so this tool will work on Windows. Issue #14

0.3.0 (2017-01-13)

  • Added mpidinfo.py script to provide information about Microscopy Product from database. Issue #6
  • Fixed bug in mpidinfo.py where passing id greater then 2^31 -1 resulted in uncaught ProgrammingException Issue #9
  • Consolidated all _setup_logging() calls into one function in config.py. Issue #8
  • Modified NcmirToolsConfig to look for configuration file in /etc/ncmirtools.conf as well as the users home directory Issue #7

0.2.0 (2016-11-8)

  • Added projectdir.py script which finds directories for a given project id. Issue #3
  • Added projectsearch.py script which given a string will search a postgres database for projects with that string in the name or description.

0.1.1 (2016-10-14)

  • Minor improvements to README.rst for better presentation on pypi

0.1.0 (2016-10-04)

  • Initial release with single script mpidir.py
Release History

Release History

This version
History Node

0.4.0

History Node

0.3.0

History Node

0.2.0

History Node

0.1.1

Download Files

Download Files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
ncmirtools-0.4.0-py2.py3-none-any.whl (37.1 kB) Copy SHA256 Checksum SHA256 py2.py3 Wheel Jun 29, 2017
ncmirtools-0.4.0.tar.gz (35.6 kB) Copy SHA256 Checksum SHA256 Source Jun 29, 2017

Supported By

WebFaction WebFaction Technical Writing Elastic Elastic Search Pingdom Pingdom Monitoring Dyn Dyn DNS Sentry Sentry Error Logging CloudAMQP CloudAMQP RabbitMQ Heroku Heroku PaaS Kabu Creative Kabu Creative UX & Design Fastly Fastly CDN DigiCert DigiCert EV Certificate Rackspace Rackspace Cloud Servers DreamHost DreamHost Log Hosting