NDEx Python utilities. Includes file conversion and importing functions
Project description
# ndex-python-utilities
In addition to python, these utilities require some additional modules.
To install these modules, type the following commands:
`shell pip install requests pip install requests-toolbelt pip install ndex `
Utility Scripts:
In all scripts that have arguments username and password, these will be the username and password for the NDEx account that you are using.
upload-to-ndex.py
`shell python upload-to-ndex.py <username> <password> <directory> `
Where <i>directory</i> contains all of the network files you want to upload.
create_network_from_tsv.py
`shell python create_network_from_tsv.py <username> <password> <ndex server> <tsv file> <import plan file> <network name> <network description> ` change_network_descriptions.py
change_network_versions.py
make_networks_public.py
make_networks_private.py
delete_all_networks.py
get_user_account_statistics.py
download_pc_pathways.py
`shell download_pc_pathways.py <datasource> <format> `
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file ndex-utils-dev-3.0.11.8.tar.gz
.
File metadata
- Download URL: ndex-utils-dev-3.0.11.8.tar.gz
- Upload date:
- Size: 22.1 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | a16f849934c8326690b6861e0ed42d0675f40641e30d9230a83cfc8c9960acbe |
|
MD5 | d58ed6bc7bd2a761bee3b1c066c85262 |
|
BLAKE2b-256 | fcca69855b44346ed61fc58037672048f20860da928a0c02ca21cee199dbeb6c |
File details
Details for the file ndex_utils_dev-3.0.11.8-py2-none-any.whl
.
File metadata
- Download URL: ndex_utils_dev-3.0.11.8-py2-none-any.whl
- Upload date:
- Size: 26.4 kB
- Tags: Python 2
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 3183ef2ee4b7582c39a1b141afaa0f0a9608787f49977b45242b2113d1ae01be |
|
MD5 | 7ca66c823310a953795dcc0f4dc8c99c |
|
BLAKE2b-256 | 4afc193e0465dbb4c473fd1aaa962ebc452a187f346a207e010ddad79504f6bd |