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Command line exporters written in Python used by the NDex REST service

Project description


Command line exporters written in Python used by the NDEx REST service.

Supported Exporters


  • Takes file in NDEx CX format and converts to format specified as a command line argument



  • Python 3.5+


pip install ndex_webapp_python_exporters

Or directly from repo (requires git)

git clone
cd ndex_webapp_python_exporters
python install

Example usage

The example below assumes is a file in NDEx CX format

cat | graphml > foo.graphml

NOTE: For the above example, the network Thyroid Cancer can be downloaded as a file named in NDEx CX format.


  • Graphml exporter derived from code developed by Cecilia Zhang

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.


0.1.1 (2018-12-4)

  • Fixed bug where list datatypes were not being stored as string in graphml exporter Issue #1

0.1.0 (2018-11-29)

  • First release on PyPI.

Project details

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Files for ndex-webapp-python-exporters, version 0.1.1
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Filename, size ndex_webapp_python_exporters-0.1.1.tar.gz (21.8 kB) File type Source Python version None Upload date Hashes View

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