ndx-fllab-novela Extension for NWB

About

ndx-fllab-novela is a python package containing NWB custom extensions.

Extensions

Edge

An undirected edge connecting two nodes in a graph.
Attributes:
name string: name of this segement node
edge_nodes array_data, data: the names of the two nodes in this undirected edge'

Node

A generic graph node. Subclass for more specific types of nodes.
Attributes:
name string: name of this node
value int: value of this node'

Apparatus

Topological graph representing connected components of a behavioral apparatus.
Attributes:
name string: name of apparatus
nodes list: Node objects contained in this apparatus
edges list: Edge objects contained in this apparatus

HeaderDevice

Representation of HeaderDevice in NWB.
Attributes:
headstage_serial string: headstage_serial from header global configuration
headstage_smart_ref_on string: headstage_smart_ref_on from header global configuration
realtime_mode string: realtime_mode from header global configuration
headstage_auto_settle_on string: headstage_auto_settle_on from header global configuration
timestamp_at_creation string: timestamp_at_creation from header global configuration
controller_firmware_version string: conntroller_firmware_version from header global configuration
controller_serial string: conntroller_serial from header global configuration
save_displayed_chan_only string: save_displayed_chan_only from header global configuration
headstage_firmware_version string: headstage_firmware_version from header global configuration
qt_version string: qt_version from header global configuration
compile_date string: compile_date from header global configuration
compile_time string: compile_time from header global configuration
file_prefix string: file_prefix from header global configuration
headstage_gyro_sensor_on string: headstage_gyro_sensor_on from header global configuration
headstage_mag_sensor_on string: headstage_mag_sensor_on from header global configuration
trodes_version string: trodes_version from header global configuration
headstage_accel_sensor_on string: headstage_accel_sensor_on from header global configuration
commit_head string: commit_head from header global configuration
system_time_at_creation string: system_time_at_creation from header global configuration
file_path string: file_path from header global configuration

NTrode

Representation of NTrode object in NWB
Attributes:
ntrode_id int: id of electrode group
electrode_group_id int: id of electrode group
bad_channels array_data: ids of bad channel
map array_data: map of ntrode

Probe

Representation of Probe object in NWB
Attributes:
id int: unique id of the probe
probe_type string: type of probe
units string: units in device
probe_description string: probe_description of probe
num_shanks int: number of shanks associated with probe
contact_side_numbering bool: is contact_side_numbering enabled
contact_size float: value of contact size as float
shanks object: shanks in the probe

This extension was created using ndx-template.