neuro-pypes 0.3.1

Reusable neuroimaging pipelines with Nipype.

# pypes

[](http://neuro-pypes.readthedocs.io) [](https://zenodo.org/badge/latestdoi/46623736)

Reusable neuroimaging pipelines using [nipype](http://nipype.readthedocs.io/) and state-of-the-art neuroimaging preprocessing software.

The objectives of this projects are:

• easy-to-use, complete, reusable, and configurable pre-processing pipelines, and

• high-quality results with the minimum manual intervention in the images.

## Documentation

Please have a look at the documentation [here](http://neuro-pypes.readthedocs.io).

## License

Licensed under the Apache License, Version 2.0.

Changelog

Version 0.3 - 0.3.1

• Add motion statistics measures in DTI pipeline.

• Improve documentation.

• Add SPM+DiReCT option to anatomical preprocessing.

• Add invoke examples in tasks.py.

• Style and bug fixes.

• Fix imports for latest nipype version.

• Add plot_ortho_slices function to nilearn interface.

Version 0.2.0 - 0.2.1

• Add mkdocs documentation and readthedocs setup.

• Add registration options for PET and fMRI. Add options for this in config.

• Add group template for fMRI and PET pipelines.

• Add brain_mask output to anatomical MR pipeline.

• Rename/re-structure fMRI pipeline and files.

• Improve PET output file namings.

• Add settings for Camino in config.

• Fix bug in _get_n_slices in slicetime_params.

• Bug fixes.