Skip to main content
This is a pre-production deployment of Warehouse. Changes made here affect the production instance of PyPI (pypi.python.org).
Help us improve Python packaging - Donate today!

Export of FSL statistical results using NIDM as specified at http://nidm.nidash.org/specs/nidm-results.html.

Project Description

NIDM-Results for FSL
====================

Export mass-univariate neuroimaging results computed in FSL (using FEAT)
as NIDM-Results packs.

A *NIDM-Results pack* is a compressed file containing a NIDM-Results
serialization and some or all of the referenced image data files in
compliance with `NIDM-Results specification`_.

Usage
'''''

::

usage: nidmfsl [-h] [-g [GROUP_NAMES [GROUP_NAMES ...]]] [-o OUTPUT_NAME] [-d]
[-v [NIDM_VERSION]] [--version]
feat_dir [numsubjects [numsubjects ...]]

NIDM-Results exporter for FSL Feat.

positional arguments:
feat_dir Path to feat directory.
numsubjects Number of subjects per group.

optional arguments:
-h, --help show this help message and exit
-g [GROUP_NAMES [GROUP_NAMES ...]], --group_names [GROUP_NAMES [GROUP_NAMES ...]]
Label for each group.
-o OUTPUT_NAME, --output_name OUTPUT_NAME
Name of the output. A ".nidm.zip" or ".nidm" (when -d
is used) suffix will be appended.
-d, --directory-output
Produces a .nidm directory rather than a .nidm.zip
file.
-v [NIDM_VERSION], --nidm_version [NIDM_VERSION]
NIDM-Results version to use (default: latest).
--version show program's version number and exit

Requirements
''''''''''''

- `nidmresults`_

Installation
''''''''''''

::

pip install nidmfsl

.. _NIDM-Results specification: http://nidm.nidash.org/specs/nidm-results.html
.. _nidmresults: http://pypi.python.org/pypi/nidmresults

Release History

This version
History Node

1.2.1

History Node

1.2.0

History Node

1.1.0

History Node

0.3.6

History Node

0.3.5

History Node

0.3.4

History Node

0.3.3

History Node

0.3.2

History Node

0.3.1

History Node

0.3.0

History Node

0.2.0

History Node

0.1.0

Download Files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, Size & Hash SHA256 Hash Help File Type Python Version Upload Date
nidmfsl-1.2.1-py2.py3-none-any.whl
(22.3 kB) Copy SHA256 Hash SHA256
Wheel py2.py3 Feb 10, 2017
nidmfsl-1.2.1.tar.gz
(18.3 kB) Copy SHA256 Hash SHA256
Source None Feb 10, 2017

Supported By

Elastic Elastic Search Pingdom Pingdom Monitoring Dyn Dyn DNS Sentry Sentry Error Logging CloudAMQP CloudAMQP RabbitMQ Heroku Heroku PaaS Kabu Creative Kabu Creative UX & Design Fastly Fastly CDN DigiCert DigiCert EV Certificate Google Google Cloud Servers DreamHost DreamHost Log Hosting