Numerical IMage Analyses.
Project description
NImA
A library and a cli to help image analyses based on scipy.ndimage and scikit-image.
- Version: “0.7.2”
Features
- easy dark and flat correction
- automatic cell segmentation
- easy ratio analyses
Installation
You can get the library directly from PyPI
using pip
:
pip install nima
Alternatively, you can use pipx to install it in an isolated environment:
pipx install nima
To enable auto completion for the nima
command, follow these steps:
-
Generate the completion script by running the following command:
_CLOP_COMPLETE=bash_source nima > ~/.local/bin/nima-complete.bash
-
Source the generated completion script to enable auto completion:
source ~/.local/bin/nima-complete.bash
Usage
To use nima in a project:
from nima import nima
See documentation for the nima
command line.
Description
A longer description of your project goes here...
Note
pyenv activate nima-...
poetry install pre-commit
install before next first commit: pre-commit run --all-files
nox --session=pre-commit -- install
and activate poetry
pyenv activate nima-0.2
poetry install
pip install .
so it is not installed in development mode and this version will persist to updates.
todo
- restore sane complexity value (< 21).
Project details
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