Optimize NMODL files for the NEURON simulator
Project description
nmodl_preprocessor
This program performs the following optimizations to ".mod" files:
- Inline parameters
- Inline temperature
- Inline functions and procedures
- Inline assigned variables with constant values
- Convert assigned variables into local variables
These optimizations can improve runtime performance by as much as 15%.
Installation
Prerequisites
pip install nmodl_preprocessor
Usage
$ nmodl_preprocessor [-h] [--celsius CELSIUS] input_path output_path
positional arguments:
input_path input filename or directory of nmodl files
output_path output filename or directory for nmodl files
options:
-h, --help show this help message and exit
--celsius CELSIUS temperature of the simulation
Tips
-
Remove variables from RANGE and GLOBAL statements unless you actually need to inspect or modify their value.
-
Remove unnecessary VERBATIM statements.
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