Skip to main content

De novo spatial reconstruction of single-cell gene expression.

Project description

PyPI Docs

novoSpaRc - de novo Spatial Reconstruction of Single-Cell Gene Expression

novoSpaRc predicts locations of single cells in space by solely using single-cell RNA sequencing data. An existing reference database of marker genes is not required, but significantly enhances performance if available.

novoSpaRc accompanies the following publication:

Gene Expression Cartography
M. Nitzan, N. Karaiskos, N. Friedman, N. Rajewsky

Read the documentation and the tutorial for more information.

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for novosparc, version 0.3.11
Filename, size File type Python version Upload date Hashes
Filename, size novosparc-0.3.11-py3-none-any.whl (14.5 kB) File type Wheel Python version py3 Upload date Hashes View
Filename, size novosparc-0.3.11.tar.gz (11.1 kB) File type Source Python version None Upload date Hashes View

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page