Ecephys and behavior workflows for the Mindscope Neuropixels team.

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  • License: MIT License (MIT)
  • Author: Ben Hardcastle
  • Requires: Python ==3.11.*
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Project description

np_workflows

This package contains all the Python code required to run Mindscope Neuropixels experiments.

Experiment workflows and related tasks are coordinated by Jupyter notebooks maintained here: https://github.com/AllenInstitute/np_notebooks

Running the notebooks requires a Python environment with:

  • Python >= 3.11
  • np_workflows
  • Jupyter / JupyterLab
git clone https://github.com/AllenInstitute/np_notebooks
conda create -n workflows python=3.11
pip install np_workflows
pip install jupyterlab

Keep the np_workflows package up-to-date by running pip install np_workflows -U before each use

To develop this package git clone then poetry install

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for bjhardcastle from gravatar.com bjhardcastle

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: MIT License (MIT)
  • Author: Ben Hardcastle
  • Requires: Python ==3.11.*
Classifiers

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