Python-based tools and utilities for NUFEB simulations
Project description
Description
Python-based tools and utilities for NUFEB simulations
Getting Started
Install via pip:
pip install nufeb-tools
Generate NUFEB simulations from the CLI:
nufeb-seed
Remove old runs:
nufeb-clean
Get data from a simulation for analysis
from nufeb_tools import utils
x = utils.get_data(directory= r'D:\runs\Run_35_37_67_1_2021-07-07')
Plot the overall growth
from nufeb_tools import plot
f, ax = plt.subplots()
plot.overall_growth(x.biomass,ax=ax)
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