Skip to main content

Convert data to nwb

Project description


Shared tools for converting data from various formats to NWB:N 2.0


To install nwbn_conversion_tools directly in an existing environment:

$ pip install nwbn-conversion-tools

Alternatively, to clone the repository and set up a conda environment, do:

$ git clone
$ conda env create -f nwbn-conversion-tools/make_env.yml
$ source activate nwbn_conversion


After activating the correct environment, nwbn_conversion_tools GUI can be imported and run from the python interpreter.

from nwbn_conversion_tools.gui.nwbn_conversion_gui import nwbn_conversion_gui

# YAML metafile
metafile = 'metafile.yml'

# Conversion module
conversion_module = ''

# Source files path
source_paths = {}
source_paths['source_file_1'] = {'type': 'file', 'path': ''}
source_paths['source_file_2'] = {'type': 'file', 'path': ''}

# Other options
kwargs = {'option_1': True, 'option_2': False}


Here you can find templates for metafile.yml and

optical physiology


Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for nwbn-conversion-tools, version 0.2.0
Filename, size File type Python version Upload date Hashes
Filename, size nwbn_conversion_tools-0.2.0-py3-none-any.whl (54.2 kB) File type Wheel Python version py3 Upload date Hashes View hashes
Filename, size nwbn-conversion-tools-0.2.0.tar.gz (40.0 kB) File type Source Python version None Upload date Hashes View hashes

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page