OakVar: Genomic Variant Analysis Platform
Listen to Deep Dive into OakVar!: https://youtu.be/MNvDdL_p5s8
Mission
OakVar is a bridge between cutting-edge genomics research and everyday people.
OakVar democratizes access to genomics knowledge for all.
What it does
Annotate genomic variants with diverse annotation sources.
Make databases of annotated variants.
Query annotated variants with filter sets.
Make reports in diverse formats.
Visualize annotated variants with graphical user interface.
Works via CLI and GUI.
Easily develop, run, and distribute CLI and GUI genomics apps. OakVar acts as an operating system for genomics apps.
Connect genomic data to AI/ML models.
Internship
The main project will be OakVar. Full remote work. Unpaid position (no funding yet). Please send your application to info@oakbioinformatics.com.
Resources
Ready to start? OakVar Documentation
Subscribe to the mailing list: Be in the loop and notified of the new releases and news of OakVar.
Medium: https://medium.com/oakvar
Discord: https://discord.gg/wZfkTMKTjG
Reddit: https://www.reddit.com/r/oakvar
Email: info@oakbioinformatics.com
Many Thanks to Our Sponsors
Organizational Sponsors
Individual Sponsors
OakVar is in CodeX
1 maintainer
Metadata
1 maintainer
Release files for oakvar 2.13.1
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| oakvar-2.13.1.tar.gz | 7.8 MB | Without provenance | Details for oakvar-2.13.1.tar.gz |
Release files / oakvar-2.13.1.tar.gz
| Download URL | oakvar-2.13.1.tar.gz |
|---|---|
| Size | 7.8 MB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
576a168ee3eecd6245fabeff900853c0d0e612057e5915178bb4e3ce676c5e26
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BLAKE2b-256 checksum How to use checksums |
5d7c33027bd12d676c91a9a9a66ba8c3bd8d8bdf6d27ce44f3e8f89aae700e60
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.12.11
|
Security for oakvar 2.13.1
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