A genomic variant analysis platform

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Author: Ryangguk Kim

Tags genomic, variant, analysis, interpretation, genome

Requires: Python >=3.8

Project description

OakVar logo

OakVar: Genomic Variant Analysis Platform

  • Annotate genomic variants with diverse annotation sources.

  • Make databases of annotated variants.

  • Query annotated variants with filter sets.

  • Make reports in diverse formats.

  • Visualize annotated variants with graphical user interface.

  • Works via CLI and GUI.

  • Easily develop, run, and distribute CLI and GUI genomics apps. OakVar acts as an operating system for genomics apps.

  • Connect genomic data to AI/ML models.

Documentation is being made at OakVar Documentation. For questions not answered in the documentation, ask on the Issues channel or email to rkim@oakbioinformatics.com.

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Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for oakbioinformatics from gravatar.com oakbioinformatics

Unverified details

These details have not been verified by PyPI
Project links
GitHub Statistics

View statistics for this project via Libraries.io, or by using our public dataset on Google BigQuery

Meta

Author: Ryangguk Kim

Tags genomic, variant, analysis, interpretation, genome

Requires: Python >=3.8


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