A command line tool for converting optical coherence tomography angiography (OCTA) data.
Project description
oct-to-tiff
A command line tool for converting optical coherence tomography angiography (OCTA) data.
Installation
pip install oct-to-tiff
Getting Started
oct-to-tiff /path/to/image.OCT
will read an OCT volume and write to a single OME-TIFF file, including voxel size in the metadata.
For more options, run oct-to-tiff --help.
Supported scan patterns
This tool has been developed for use with data from the Optovue RTVue XR Avanti System.
Due to limited test data, only the following scan patterns are currently supported:
OCT
- 3D Cornea
- 3D Disc
- 3D Retina
- 3D Widefield
- 3D Widefield MCT
- Angle
- Cornea Cross Line
- Cornea Line
- Cross Line
- Enhanced HD Line
- GCC
- Grid
- Line
- Pachymetry Wide
- Radial Lines
- Raster
OCTA
- Angio Disc
- Angio Retina
- HD Angio Disc
- HD Angio Retina
Requirements
Requires Python 3.7 or higher.
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Source Distribution
oct_to_tiff-0.1.0.tar.gz
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