ols-client

Interact with EBI Ontology Lookup Service

Project description

A Python wrapper for accessing the RESTful API of the Ontology Lookup Service

Installation

Install the latest stable version from PyPI

$ python3 -m pip install ols_client

Install the latest version directly from GitHub

$ python3 -m pip install git+https://github.com/cthoyt/ols-client.git

Cookbook

Getting labels from ontology

>>> from ols_client import get_labels
>>> labels = get_labels('chebi')

Getting labels from ontology using an alternative OLS

>>> from ols_client import get_labels
>>> labels = get_labels('chebi', ols_base='http://lookup.scaiview.com/ols-boot/api/')

Using the CLI

$ python3 -m ols_client labels chebi > chebi.txt

Project details

Release history Release notifications | RSS feed

0.1.4

May 6, 2023

0.1.3

Feb 21, 2023

0.1.2

Sep 16, 2022

0.1.1

Sep 9, 2022

0.1.0

Sep 7, 2022

0.0.9

Nov 2, 2017

0.0.8

Oct 7, 2017

0.0.7

Sep 30, 2017

0.0.6

Sep 30, 2017

0.0.4

Aug 8, 2017

This version

0.0.2

Jul 28, 2017

0.0.1

Jul 12, 2017

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ols_client-0.0.2.tar.gz (3.7 kB view hashes)

Uploaded Jul 28, 2017 Source

Built Distribution

ols_client-0.0.2-py3-none-any.whl (5.4 kB view hashes)

Uploaded Jul 28, 2017 Python 3

Hashes for ols_client-0.0.2.tar.gz

Hashes for ols_client-0.0.2.tar.gz
Algorithm	Hash digest
SHA256	`2c827a99426a6966b1c568d1db2b8fb77c831f6b065ed5fe0994ec6c38b86877`
MD5	`3f82451f328bf90d4811a01d2d11b942`
BLAKE2b-256	`b96c8e9eee1a9229123eed069fe95f6ed47236a86285ef41e97d5812cf6ec876`

Hashes for ols_client-0.0.2-py3-none-any.whl

Hashes for ols_client-0.0.2-py3-none-any.whl
Algorithm	Hash digest
SHA256	`386ac32c0f73e9321217c1ef8de7fc0612812dc1fbe7f97e21abf7f50c81f347`
MD5	`e83d538490a917603ac6a88d814dd445`
BLAKE2b-256	`6cc309b59140cbddb6ca1fb8db9a802fb2ac69199867b83707fc823c58bd6f23`