A package for manipulating omics data file types
Project description
omicsdata
The omicsdata package is for reading/writing/manipulating genomics data files. The package is hosted here. For more examples and documentation please see our readthedocs page.
The omicsdata package can be used to do the following:
- read simple somatic mutation (SSM) files
- convert variant call format files to an SSM format
- manipulate phylogenetic tree data
Installation
omicsdata is easy to install using pip
pip3 install omicsdata
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