Skip to main content

Ontology utilities at targetvalidation.org

Project description

PyPI version

Build Status

codecov

Python package with a set of utilities to:

  • download latest version of specific ontologies (tested on EFO, ECO, HP, MP)
  • extract information from ontology OBO and OWL file format
  • query this information from memory
  • map ontology identifiers to other ontology identifiers
  • map ontology labels to relevant ontology identifiers

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

opentargets-ontologyutils-1.1.0.tar.gz (9.6 kB view details)

Uploaded Source

Built Distributions

opentargets_ontologyutils-1.1.0-py3-none-any.whl (15.7 kB view details)

Uploaded Python 3

opentargets_ontologyutils-1.1.0-py2-none-any.whl (15.7 kB view details)

Uploaded Python 2

File details

Details for the file opentargets-ontologyutils-1.1.0.tar.gz.

File metadata

  • Download URL: opentargets-ontologyutils-1.1.0.tar.gz
  • Upload date:
  • Size: 9.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0 requests/2.21.0 setuptools/40.6.3 requests-toolbelt/0.8.0 tqdm/4.29.0 CPython/3.6.3

File hashes

Hashes for opentargets-ontologyutils-1.1.0.tar.gz
Algorithm Hash digest
SHA256 c29fecda4cd1dcb89e60d1e5da7cb95ecdd56b7af3d1c2be74ebcb651cc5d5ef
MD5 5467e039d62fcb445c562f4c318844d0
BLAKE2b-256 2d8f0f305bd939d224e3574219322b5bef0693eb21806bccdcf2ba30d5d0ceae

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.1.0-py3-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.1.0-py3-none-any.whl
  • Upload date:
  • Size: 15.7 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0 requests/2.21.0 setuptools/40.6.3 requests-toolbelt/0.8.0 tqdm/4.29.0 CPython/3.6.3

File hashes

Hashes for opentargets_ontologyutils-1.1.0-py3-none-any.whl
Algorithm Hash digest
SHA256 614ba756d3ed920dce2466de7a1acf6a98e3f9037e33d7b06d0709b9a6cbe671
MD5 2d3e8be69fc6fb4d3fbeafec6aa0406e
BLAKE2b-256 083f9968fd1daedbe258b87239500ecd7ec49edea6d0905d81a9f73e76041de2

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.1.0-py2-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.1.0-py2-none-any.whl
  • Upload date:
  • Size: 15.7 kB
  • Tags: Python 2
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.5.0 requests/2.21.0 setuptools/40.6.3 requests-toolbelt/0.8.0 tqdm/4.29.0 CPython/2.7.14

File hashes

Hashes for opentargets_ontologyutils-1.1.0-py2-none-any.whl
Algorithm Hash digest
SHA256 2bd3aea8500e5c366bbcbd7e31175e4c9e874f79dc3c3ba77e81e6b98ba94bc0
MD5 4530a9600c3e6d5b60415524a3e0f6c9
BLAKE2b-256 b32f3bfed2ca3398a83b3481d50db59c1a9f3174dfee6ef93a757515703304e7

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page