Skip to main content

Ontology utilities at targetvalidation.org

Project description

PyPI version

Build Status

codecov

Python package with a set of utilities to:

  • download latest version of specific ontologies (tested on EFO, ECO, HP, MP)
  • extract information from ontology OBO and OWL file format
  • query this information from memory
  • map ontology identifiers to other ontology identifiers
  • map ontology labels to relevant ontology identifiers

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

opentargets-ontologyutils-1.2.2.tar.gz (9.5 kB view details)

Uploaded Source

Built Distributions

opentargets_ontologyutils-1.2.2-py3-none-any.whl (15.5 kB view details)

Uploaded Python 3

opentargets_ontologyutils-1.2.2-py2-none-any.whl (15.5 kB view details)

Uploaded Python 2

File details

Details for the file opentargets-ontologyutils-1.2.2.tar.gz.

File metadata

  • Download URL: opentargets-ontologyutils-1.2.2.tar.gz
  • Upload date:
  • Size: 9.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.6.3

File hashes

Hashes for opentargets-ontologyutils-1.2.2.tar.gz
Algorithm Hash digest
SHA256 30a0a4c2c58a568eae58741f3cbf1d4ca4392b4a4ad7398c858c25150dd21a45
MD5 8c64a976f7b4208426fcd3534a8fb8f1
BLAKE2b-256 4135436776f559c2970692b671632ee708fbceed0a0602ac6110129f1d51f547

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.2.2-py3-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.2.2-py3-none-any.whl
  • Upload date:
  • Size: 15.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.6.3

File hashes

Hashes for opentargets_ontologyutils-1.2.2-py3-none-any.whl
Algorithm Hash digest
SHA256 cb9a657459e0ebe4e8e76e5fb97c56d874424b161ab10bc02920df1217d08d12
MD5 79301807881621e454c6ad1985b5f255
BLAKE2b-256 d1ca87b4c55a06ff41a679a71e4ca2ca6a416a2f8f4b1c047f7ec0e764013ec4

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.2.2-py2-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.2.2-py2-none-any.whl
  • Upload date:
  • Size: 15.5 kB
  • Tags: Python 2
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/2.7.14

File hashes

Hashes for opentargets_ontologyutils-1.2.2-py2-none-any.whl
Algorithm Hash digest
SHA256 816c6ce2209c179799f844c78abd5a9a484f2e5e33f09f4ee3dc8cd8de3d3e5e
MD5 3d1859f45b9ebadf7a22b0a7735e3f9b
BLAKE2b-256 b13c1c0cd5ef03e8abbf992c4acbc10762d32b3415fe67d266ccd5e011291f64

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page