Skip to main content

Ontology utilities at targetvalidation.org

Project description

PyPI version

Build Status

codecov

Python package with a set of utilities to:

  • download latest version of specific ontologies (tested on EFO, ECO, HP, MP)
  • extract information from ontology OBO and OWL file format
  • query this information from memory
  • map ontology identifiers to other ontology identifiers
  • map ontology labels to relevant ontology identifiers

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

opentargets-ontologyutils-1.2.3.tar.gz (7.9 kB view details)

Uploaded Source

Built Distributions

opentargets_ontologyutils-1.2.3-py3-none-any.whl (14.0 kB view details)

Uploaded Python 3

opentargets_ontologyutils-1.2.3-py2-none-any.whl (14.0 kB view details)

Uploaded Python 2

File details

Details for the file opentargets-ontologyutils-1.2.3.tar.gz.

File metadata

  • Download URL: opentargets-ontologyutils-1.2.3.tar.gz
  • Upload date:
  • Size: 7.9 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/2.0.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.4.0 requests-toolbelt/0.9.1 tqdm/4.36.1 CPython/3.6.7

File hashes

Hashes for opentargets-ontologyutils-1.2.3.tar.gz
Algorithm Hash digest
SHA256 01093bb3765d2cfa66b9e648f06cf45c7e1e987b6dfa9c7a8c50e0a16749a0d7
MD5 58a9c7b1e48242e998c83a143faf5763
BLAKE2b-256 18a1adbaa077ac803bb2a9c7ff1e3887205e88fa4ab2d196a368a21316717b99

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.2.3-py3-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.2.3-py3-none-any.whl
  • Upload date:
  • Size: 14.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/2.0.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.4.0 requests-toolbelt/0.9.1 tqdm/4.36.1 CPython/3.6.7

File hashes

Hashes for opentargets_ontologyutils-1.2.3-py3-none-any.whl
Algorithm Hash digest
SHA256 2f34101d2acb2e61e645aaf4a66d40c275161cf112b9842f6c3f154980a12dcf
MD5 74c4fdd27b9003de6285e05e40eb7a50
BLAKE2b-256 49f06a290fb1cf4fabee05e040207dbf4add1da97c44f9bdc0d9ac89beec2f0b

See more details on using hashes here.

File details

Details for the file opentargets_ontologyutils-1.2.3-py2-none-any.whl.

File metadata

  • Download URL: opentargets_ontologyutils-1.2.3-py2-none-any.whl
  • Upload date:
  • Size: 14.0 kB
  • Tags: Python 2
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.15.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.4.0 requests-toolbelt/0.9.1 tqdm/4.36.1 CPython/2.7.15

File hashes

Hashes for opentargets_ontologyutils-1.2.3-py2-none-any.whl
Algorithm Hash digest
SHA256 a109a79ec406f7fbd7b016a41312bab8f13d7fa4804fa0ef98b8baeb8af36cf6
MD5 0f4bd4e349df3a7cbab5139c6cac7174
BLAKE2b-256 2fd5cd7fec21f7dab2b7de6fa2a7c20552bb9d7cb46cfad5ed7c3b0b46bb4960

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page