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Particle transport packages for the Paegan library

Project description

The parallelized Lagrangian transport model for NetCDF/OPeNDAP data, written on top of [Paegan](https://github.com/asascience-open/paegan)

Setup

You are using virtualenv, right?

  1. Install [virtualenv-burrito](https://github.com/brainsik/virtualenv-burrito)
  2. Create virtualenv named “paegan-transport-dev”: mkvirtualenv -p your_python_binary paegan-transport-dev
  3. Start using your new virtualenv: workon paegan-transport-dev

Installation

Paegan-Transport requires python 2.7.x and is available on PyPI.

The best way to install Paegan-Transport is through pip:

`bash pip install paegan-transport `

Paegan-Transport requires the following python libraries which will be downloaded and installed through pip:

  • Fiona>=0.8
  • requests>=1.2.3
  • paegan
  • redis
  • geojson

See the [Paegan](https://github.com/asascience-open/paegan) documentation for installing other dependencies related to Paegan.

Roadmap

  • More behaviors

Troubleshooting

If you are having trouble getting any of the paegan functionality to work, try running the tests:

`bash git clone git@github.com:asascience-open/paegan-transport.git` cd paegan-transport pip install pytest python -m pytest -s `

If you want to run the any model controller or shoreline tests, you will need to edit the test files with paths appropriate for your system. Default is /data/lm with /data/lm/bathy and /data/lm/shore filled in with the files below.

Some tests require large files that are not in source control. You can get them here: * ETOPO1 Global Bathymetry ([ETOPO1_Bed_g_gmt4.grd](http://s3.amazonaws.com/paegan/resources/ETOPO1_Bed_g_gmt4.grd)) * Shoreline files (unzip) ([shore.zip](https://s3.amazonaws.com/paegan/resources/shore.zip))

Contributors

Project details


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