GUI software for photogrammetry-assisted probe targeting in electrophysiology
Project description
Parallax
Parallax is a graphical user interface designed to streamline the process of setting up and performing acute in vivo electrophysiology experiments.
Prerequisites
Installation
- Clone the repository:
git clone https://github.com/AllenNeuralDynamics/parallax.git
- Create virtual environment and activate it:
- On Windows:
python -m venv venv
./venv/Scripts/activate
- On Linux/Mac:
python -m venv venv
source venv/bin/activate
- Install Dependencies:
python -m pip install -e .
Running Parallax
python -m parallax
Additional Setup for Linux and Mac OS
For Linux or Mac OS, you'll need to install PySpin manually (not required for Windows):
- download the Spinnaker SDK package for your system from here
- follow the installation instructions in the README
- Install the Python bindings found alongside the SDK package
Support and Contribution
If you encounter any issues or would like to contribute to the project, please check out our issues page on GitHub.
License
Parallax is licensed under the Allen Institute Software License. For more details, see the LICENSE file.
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