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Perturbation Analysis in the scverse ecosystem.

Project description

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pertpy

Features

  • Differential cell type perturbation analysis with Augurpy
  • Analysis of CRISPR-KO screens with Mixscape
  • Compositional analysis with Milo and tascCODA

Installation

You can install pertpy via pip from PyPI:

$ pip install pertpy

Usage

Please see Usage for details.

Credits

This package was created with cookietemple using Cookiecutter based on Hypermodern_Python_Cookiecutter.

Project details


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