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CUDA-Based image processing for single molecule localization microscopy

Project description

A C++/CUDA toolbox with python bindings for doing single molecule microscopy image processing.

Features include:
Work in progress:
  • UI
  • Drift correction using redundant cross-correlation (needs reliability checks)
  • Cubic spline PSFs

Currently compiled for CUDA 10.2 / Windows x64 using Visual Studio 2019

Credits to Willem Melching (@pd0wm) for general debugging and implementation of astigmatic Gaussian PSF models, as well as yet unpublished code.

Project details


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