Spike sorting and ephys data analysis for 1000 channels and beyond
Project description
# phy-contrib
[![Build Status](https://img.shields.io/travis/kwikteam/phy-contrib.svg)](https://travis-ci.org/kwikteam/phy-contrib) [![PyPI release](https://img.shields.io/pypi/v/phycontrib.svg)](https://pypi.python.org/pypi/phycontrib)
Plugins for [phy](https://github.com/kwikteam/phy). Currently, this package provides two integrated spike sorting GUIs:
KwikGUI: to be used with Klusta and the Kwik format (successor of KlustaViewa)
TemplateGUI: to be used with KiloSort and SpykingCircus
## Quick install
You first need to install [phy](https://github.com/kwikteam/phy). Then, activate your conda environment and do:
`bash pip install phycontrib `
### Installing the development version
If you want to use the bleeding-edge version, do:
` git clone https://github.com/kwikteam/phy-contrib.git cd phy-contrib python setup.py develop `
Then, you can update at any time with:
` cd phy-contrib git pull `
## Documentation
[Main documentation](http://phy-contrib.readthedocs.io/en/latest/)
KwikGUI documentation (work in progress)
[TemplateGUI documentation](http://phy-contrib.readthedocs.io/en/latest/template-gui/)
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
File details
Details for the file phycontrib-1.0.15.tar.gz
.
File metadata
- Download URL: phycontrib-1.0.15.tar.gz
- Upload date:
- Size: 16.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 0b316636df9c0690210984f8da6eff61f0c72344a7c61c88c31148e97fcab6d3 |
|
MD5 | 80485c9c5034599b1d2343f8694b44de |
|
BLAKE2b-256 | 9bddd9b7ab06b88d757507d8b8758fe1e1c721f1feccdaecc94b3888a8880051 |
File details
Details for the file phycontrib-1.0.15-py2.py3-none-any.whl
.
File metadata
- Download URL: phycontrib-1.0.15-py2.py3-none-any.whl
- Upload date:
- Size: 20.3 kB
- Tags: Python 2, Python 3
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 48597a1746edc6f90d05f8ecc8de3a3b3fb8eb413bb250d53b158ae408d1771a |
|
MD5 | 0f85cdf0cc3476c571d99014465c4c59 |
|
BLAKE2b-256 | 840414ad6450fac4b5fcdc005f1375310c488af36626fae42cbfd9675090e1bb |