A package to calculate genetic convergence and draw phylogenetic trees.
Project description
PhyloConverge
PhyloConverge is a Python package designed to calculate the percentage of convergence between different species at the genetic level, identify possible common ancestors, and draw a phylogenetic tree to illustrate the convergence.
Features
- Read genetic sequences from a FASTA file.
- Align sequences using ClustalW.
- Calculate genetic convergence between species.
- Construct a phylogenetic tree.
- Visualize the phylogenetic tree using Matplotlib.
Installation
You can install PhyloConverge using pip:
pip install phylo_converge
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
phylo_converge-0.1.1.tar.gz
(2.8 kB
view details)
Built Distribution
File details
Details for the file phylo_converge-0.1.1.tar.gz.
File metadata
- Download URL: phylo_converge-0.1.1.tar.gz
- Upload date:
- Size: 2.8 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.1.1 CPython/3.8.10
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 12a1205e044039e22b667b9cf8a238a9ba239fb00ecf92355ee8151a90e96078 |
|
| MD5 | 601a556cedc674052138051831f57417 |
|
| BLAKE2b-256 | 0ad5dfbc5371c7408cbf7c86994caf88065e63ed1bfb21021b0d4e51b4a553d3 |
File details
Details for the file phylo_converge-0.1.1-py3-none-any.whl.
File metadata
- Download URL: phylo_converge-0.1.1-py3-none-any.whl
- Upload date:
- Size: 4.8 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/5.1.1 CPython/3.8.10
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | d279917a6dbc8ca8559be9f58676167cb65addc81d1d5a77167d261db4fc796b |
|
| MD5 | 78780dfc9d5e50d6fb28ea37f8fb7724 |
|
| BLAKE2b-256 | fdc95f12d5df9a4857aae7c7837a3c7d788fe0a9aa2f3d65054cb1e29997e20d |
