Skip to main content
Join the official 2020 Python Developers SurveyStart the survey!

Convert pileup to SAM

Project description


A partial implementation of a pileup to SAM format conversion tool.

  • This is an inefficient and naive implementation, but it seems to do the trick.
  • Does not support indels!

Example usage

pileup2sam -r test/cases/simulated.fa test/cases/simulated.head100.pileup out.sam

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for pileup2sam, version 0.3.0
Filename, size File type Python version Upload date Hashes
Filename, size pileup2sam-0.3.0.tar.gz (4.7 kB) File type Source Python version None Upload date Hashes View

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page