pmtutils
PyMetaTome utilities. When working with the PyMetaTome pipeline, there is a need for portable helper tools that can easily be added to custom containers.
These utilities are currently targeted at key processes in PyMetaTome:
- Database creation and similarity matrix construction.
- YAML metadata file operations.
- Read sampling prior to bioinformatic analyses.
- Webhook handling.
pmtutils requires Samtools and ClustalW2 for database creation.
Python dependencies:
- Biopython
- ruamel_yaml
- NumPy
- flask
1 maintainer
Metadata
1 maintainer
Release files for pmtutils 0.0.1
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Source distribution (sdist)
| File | Size | Uploaded | |
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| pmtutils-0.0.1.tar.gz | 3.3 kB | Details |
Release files / pmtutils-0.0.1.tar.gz
| Download URL | pmtutils-0.0.1.tar.gz |
|---|---|
| Size | 3.3 kB |
| Tags | Source |
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