Skip to main content

pool-sharq: python interface for Broad Institute GPP's poolq software.

Project description


Python wrapper for the Broad Institute GPP's poolq software

Uses the BeautifulSoup webscraping library to check for the latest distribution of poolq from the Broad Institute's GPP. Downloads the latest distribution if it is not already downloaded.


pip install pool_sharq


import pool_sharq

poolq = pool_sharq.poolq(dir="/path/to/data/") # contains rows.txt and columns.txt along with fastq files.

You can also download / use test data provided by the GPP

poolq = pool_sharq.poolq() # point to test data

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pool-sharq-0.0.1.tar.gz (2.7 kB view hashes)

Uploaded Source

Built Distribution

pool_sharq-0.0.1-py3-none-any.whl (2.9 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page