predictit 2.0.5

Library/framework for making predictions.

predictit

Library/framework for making predictions. Choose best of 20 models (ARIMA, regressions, LSTM...) from libraries like statsmodels, scikit-learn, tensorflow and some own models. There are hundreds of customizable options (it's not necessary of course) as well as some config presets.

Library contain model hyperparameters optimization as well as option variable optimization. That means, that library can find optimal preprocessing (smoothing, dropping non correlated columns, standardization) and on top of that it can find optimal models inner parameters such as number of neuron layers.

Output

Most common output is plotly interactive graph, numpy array of results or detailed dataframe results.

Return type of main predict function depends on configuration.py. It can return best prediction as array or all predictions as dataframe. Interactive html plot is also created.

Oficial repo and documentation links

Repo on github

Official readthedocs documentation

Installation

Python >=3.6 (Python 2 is not supported).

Install just with

pip install predictit

Sometime you can have issues with installing some libraries from requirements (e.g. numpy because not BLAS / LAPACK). There are also two libraries - Tensorflow and pyodbc not in requirements, because not necessary, but troublesome. If library not installed with pip, check which library don't work, install manually with stackoverflow and repeat...

There are some libraries that not every user will be using (e.g. Tensorflow or libraries for some data inputs). If you want to be sure to have all libraries, you can download requirements_advanced.txt and then install advanced requirements with pip install -r requirements_advanced.txt.

Versions troubleshooting => Software is build in way, that it should be the best using latest versions of dependencies. In most cases older versions works well as well. Only exception can be author's library mydatapreprocessing, which is new and under development (API is not stable) and some version of predictit has dependency on particular version of mydatapreprocessing. Clean install of latest versions fix issue.

Library was developed during 2020 and structure and even API (configuration) changed a lot. From version 1.60 it's considered to be stable and code made for library will work till 2.0.0.

How to

Software can be used in three ways. As a python library or with command line arguments or as normal python scripts. Main function is predict in main.py script. There is also predict_multiple_columns function if you want to predict more at once (columns or time frequentions) and also compare_models function that tell you which models are best. It evaluate error criterion on out of sample test data instead of predict (use as much as possible) so more reliable errors (for example decision trees just assign input from learning set, so error in predict is 0, in compare_models it's accurate). Then you can use only good models in predict function.

Simple example of using predictit as a python library and function arguments

import predictit
import numpy as np

predictions_1 = predictit.predict(data=np.random.randn(100, 2), predicted_column=1, predicts=3, return_type='best')

# There are only two positional arguments (because, there is more than hundred configurable values).
# data and predicted_column, so you can use also

mydata = pd.DataFrame(np.random.randn(100, 2), columns=['a', 'b'])
predictions_1_positional = predictit.predict(mydata, 'b')

Simple example of using as a python library and editing Config

import predictit
from predictit.configuration import Config

# You can edit Config in two ways
Config.data = 'https://raw.githubusercontent.com/jbrownlee/Datasets/master/daily-min-temperatures.csv'  # You can use local path on pc as well... "/home/name/mycsv.csv" !
Config.predicted_column = 'Temp'  # You can use index as well
Config.datetime_column = 'Date'  # Will be used for resampling and result plot description
Config.freq = "D"  # One day - one value resampling
Config.resample_function = "mean"  # If more values in one day - use mean (more sources)
Config.return_type = 'detailed_dictionary'
Config.debug = 0  # Ignore warnings

# Or
Config.update({
    'datalength': 300,  # Used datalength
    'predicts': 14,  # Number of predicted values
    'default_n_steps_in': 12  # Value of recursive inputs in model (do not use too high - slower and worse predictions)
})

predictions_2 = predictit.predict()

Simple example of using main.py as a script

Open configuration.py (only script you need to edit (very simple)), do the setup. Mainly used_function and data or data_source and path. Then just run main.py.

Simple example of using command line arguments

Run code below in terminal in predictit folder. Use python main.py --help for more parameters info.

python main.py --used_function predict --data 'https://raw.githubusercontent.com/jbrownlee/Datasets/master/daily-min-temperatures.csv' --predicted_column "'Temp'"

Explore Config

Type Config., then, if not autamatically, use ctrl + spacebar to see all posible values. To see what option means, type for example Config.return_type, than do mouseover with pressed ctrl. It will reveal comment that describe the option (at least at VS Code)

To see all the possible values in configuration.py, use

predictit.configuration.print_config()

Example of compare_models function

import predictit
from predictit.configuration import Config

my_data_array = np.random.randn(200, 2)  # Define your data here

# You can compare it on same data in various parts or on different data (check configuration on how to insert dictionary with data names)
Config.update({
    'data_all': {'First part': (my_data_array[:100], 0), 'Second part': (my_data_array[100:], 1)}
})

compared_models = predictit.compare_models()

Example of predict_multiple function

import predictit
from predictit.configuration import Config

Config.data = np.random.randn(120, 3)
Config.predicted_columns = ['*']  # Define list of columns or '*' for predicting all of the numeric columns
Config.used_models = ['Conjugate gradient', 'Decision tree regression']  # Use just few models to be faster

multiple_columns_prediction = predictit.predict_multiple_columns()

Example of Config variable optimization

Config.update({
    'data': "https://raw.githubusercontent.com/jbrownlee/Datasets/master/daily-min-temperatures.csv",
    'predicted_column': 'Temp',
    'return_type': 'all_dataframe',
    'datalength': 120,
    'optimization': 1,
    'optimization_variable': 'default_n_steps_in',
    'optimization_values': [4, 6, 8],
    'plot_all_optimized_models': 0,
    'print_table': 2,  # Print detailed table
    'used_models': ['AR', 'Sklearn regression']
})

predictions_optimized_config = predictit.predict()

Hyperparameters tuning

To optmize hyperparameters, just set optimizeit: 1, and model parameters limits. It is commented in Config.py how to use it. It's not grid bruteforce. Heuristic method based on halving interval is used, but still it can be time consuming. It is recomend only to tune parameters worth of it. Or tune it by parts.

GUI

It is possible to use basic GUI. But only with CSV data source. Just run gui_start.py if you have downloaded software or call predictit.gui_start.run_gui() if you are importing via PyPI.

Screenshot of such a GUI

Better GUI with fully customizable settings will be shipped next year hopefully.

Feature derivation

It is possible to add new data that is derived from original. It can be running fourier transform maximum or two columns multiplication or rolling standard deviation.

Categorical embedings

It is also possible to use string values in predictions. You can choose Config values 'embedding' 'label' and every unique string will be assigned unique number, 'one-hot' create new column for every unique string (can be time consuming).

Feature extraction

Under development right now :[

Data preprocessing, plotting and other Functions

You can use any library functions separately for your needs of course. mydatapreprocessing, mylogging and mypythontools are my other projects, which are used heavily. Example is here

from mydatapreprocessing import load_data, data_consolidation, preprocess_data
from mypythontools.plots import plot
from predictit.analyze import analyze_column

data = "https://blockchain.info/unconfirmed-transactions?format=json"

# Load data from file or URL
data_loaded = load_data(data, request_datatype_suffix=".json", predicted_table='txs', data_orientation="index")

# Transform various data into defined format - pandas dataframe - convert to numeric if possible, keep
# only numeric data and resample ifg configured. It return array, dataframe
data_consolidated = data_consolidation(
    data_loaded, predicted_column="weight", remove_nans_threshold=0.9, remove_nans_or_replace='interpolate')

# Predicted column is on index 0 after consolidation)
analyze_column(data_consolidated.iloc[:, 0])

# Preprocess data. It return preprocessed data, but also last undifferenced value and scaler for inverse
# transformation, so unpack it with _
data_preprocessed, _, _ = preprocess_data(data_consolidated, remove_outliers=True, smoothit=False,
                                        correlation_threshold=False, data_transform=False, standardizeit='standardize')

# Plot inserted data
plot(data_preprocessed)

Using just one model apart main function

Main benefit is performance boost. You can have code inder the controll much simpler (much less code), but no features from configuration available.

import mydatapreprocessing as mdp

data = mdp.generatedata.gen_sin(1000)
test = data[-7:]
data = data[: -7]
data = mdp.preprocessing.data_consolidation(data)
(X, y), x_input, _ = mdp.inputs.create_inputs(data.values, 'batch', input_type_params={'n_steps_in': 6})  # First tuple, because some models use raw data - one argument, e.g. [1, 2, 3...]

trained_model = predictit.models.sklearn_regression.train((X, y), regressor='BayesianRidge')
predictions_one_model = predictit.models.sklearn_regression.predict(x_input, trained_model, predicts=7)

predictions_one_model_error = predictit.evaluate_predictions.compare_predicted_to_test(predictions_one_model, test, error_criterion='mape')  # , plot=1

Example of using library as a pro with deeper editting Config

import predictit
from predictit.configuration import Config

Config.update({
    'data': r'https://raw.githubusercontent.com/jbrownlee/Datasets/master/daily-min-temperatures.csv',  # Full CSV path with suffix
    'predicted_column': 'Temp',  # Column name that we want to predict
    'datalength': 200,
    'predicts': 7,  # Number of predicted values - 7 by default
    'print_number_of_models': 6,  # Visualize 6 best models
    'repeatit': 50,  # Repeat calculation times on shifted data to evaluate error criterion
    'other_columns': 0,  # Whether use other columns or not
    'debug': 1,  # Whether print details and warnings

    # Chose models that will be computed - remove if you want to use all the models
    'used_models': [
        "AR",
        "ARIMA",
        "Autoregressive Linear\nneural unit",
        "Conjugate gradient",
        "Sklearn regression",
        "Bayes ridge regression one column one step",
        "Decision tree regression",
    ],

    # Define parameters of models

    'models_parameters': {

        "AR": {'used_model': 'ar', 'method': 'cmle', 'ic': 'aic', 'trend': 'nc', 'solver': 'lbfgs'},
        "ARIMA": {'used_model': 'arima', 'p': 6, 'd': 0, 'q': 0},

        "Autoregressive Linear\nneural unit": {'mi_multiple': 1, 'mi_linspace': (1e-5, 1e-4, 3), 'epochs': 10, 'w_predict': 0, 'minormit': 0},
        "Conjugate gradient": {'epochs': 80},

        "Bayes ridge regression": {'regressor': 'BayesianRidge', 'n_iter': 300, 'alpha_1': 1.e-6, 'alpha_2': 1.e-6, 'lambda_1': 1.e-6, 'lambda_2': 1.e-6},
    }
})

predictions_configured = predictit.predict()

Performance - How to scale

Time series prediction is very different than image recognition and more data doesn't necesarilly means better prediction. If you're issuing performance problems, try fast preset (turn off optimizations, make less recurent values, choose only few models, threshold datalength etc.) you can edit preset if you need. If you still have performance troubles and you have too much data, use resampling and select only valuable columns - for example correlation_threshold and do not derive extra columns. If you are interested mostly in predictions and not in the plot, turn the plot of.

Future work

It's planned to do real GUI and possibility to serve web app as well as desktop. Scalability can be solved two ways. First is incremental learning (not every model supports today). Second is virtualisation (processes running in cluster separately).

There is very big todo list on root called TODO.md.

For developers

Any help from other developers very appreciated... :D Dont be shy to create Issue or text on [e-mail]