Skip to main content

An IPython interface for embedding 3Dmol.js views in Jupyter notebooks

Project description

A simple [IPython/Jupyter](http://jupyter.org/) widget to embed an interactive [3Dmol.js](http://3dmol.org) viewer in a notebook.

The widget is completely static, which means the viewer doesn’t need a running IPython kernel to be useful and web pages and presentations generated from the notebook will work as expected. However, this also means there is only one-way communication between the notebook and the viewer.

If you experience problems, please file an [issue](https://github.com/3dmol/3Dmol.js/issues).

[An example notebook](http://nbviewer.jupyter.org/github/3dmol/3Dmol.js/blob/master/py3Dmol/examples.ipynb)

Installation

From PyPI:

pip install py3Dmol

Usage

Open a notebook

jupyter notebook

and issue

`Python import py3Dmol view = py3Dmol.view(query='pdb:1ubq') view.setStyle({'cartoon':{'color':'spectrum'}}) view `

API

The returned view object has the exact same API as [$3Dmol.GLViewer](https://3dmol.org/doc/GLViewer.html) with the exception that functions return None.

License

MIT

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

py3Dmol-2.4.2.tar.gz (7.7 kB view details)

Uploaded Source

Built Distribution

py3Dmol-2.4.2-py2.py3-none-any.whl (7.0 kB view details)

Uploaded Python 2 Python 3

File details

Details for the file py3Dmol-2.4.2.tar.gz.

File metadata

  • Download URL: py3Dmol-2.4.2.tar.gz
  • Upload date:
  • Size: 7.7 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/5.0.0 CPython/3.10.12

File hashes

Hashes for py3Dmol-2.4.2.tar.gz
Algorithm Hash digest
SHA256 990ed67b2dda5493d21192fef53a52be6128b8afbdc13da8a40a009060120749
MD5 09d065aac7e39d6302fb383780343fcb
BLAKE2b-256 8dba78bc5b451f314c06e6c2a3ca0f0ba18ee751f10e99fed94fc09175b16031

See more details on using hashes here.

Provenance

File details

Details for the file py3Dmol-2.4.2-py2.py3-none-any.whl.

File metadata

  • Download URL: py3Dmol-2.4.2-py2.py3-none-any.whl
  • Upload date:
  • Size: 7.0 kB
  • Tags: Python 2, Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/5.0.0 CPython/3.10.12

File hashes

Hashes for py3Dmol-2.4.2-py2.py3-none-any.whl
Algorithm Hash digest
SHA256 bec23d9a015d692279a5f7d4db92803e4e82ba3bdcc1434a5b6a2be98a347856
MD5 f5e44864bde06c3865d23307b0217710
BLAKE2b-256 0420923885064f4e4d4392eb2be798532d91b315f9e60ef44f49f4800ba3c57a

See more details on using hashes here.

Provenance

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page