Circular visualization in Python
Project description
pyCirclize: Circular visualization in Python
Table of contents
Overview
pyCirclize is a circular visualization python package implemented based on matplotlib. This package is developed for the purpose of easily and beautifully plotting circular figure such as Circos Plot and Chord Diagram in Python. In addition, useful genome and phylogenetic tree visualization methods for the bioinformatics field are also implemented. pyCirclize was inspired by circlize and pyCircos. More detailed documentation is available here.
Fig.1 pyCirclize example plot gallery
Installation
Python 3.8 or later is required for installation.
Install PyPI package:
pip install pycirclize
Install conda-forge package:
conda install -c conda-forge pycirclize
API Usage
API usage is described in each of the following sections in the document.
Not Implemented Features
List of features implemented in other Circos plotting tools but not yet implemented in pyCirclize. I may implement them when I feel like it.
- Plot histogram
- Plot boxplot
- Plot violin
- Plot raster image
- Label position auto adjustment
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file pycirclize-0.1.0.tar.gz.
File metadata
- Download URL: pycirclize-0.1.0.tar.gz
- Upload date:
- Size: 198.2 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: poetry/1.3.1 CPython/3.9.16 Linux/5.15.0-1024-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
7f83e406636cee351788162a0a772b1cf91854067c67ca1942609ad141b5e1a4
|
|
| MD5 |
637490e29fbe78cf6b6cbd8f6775360a
|
|
| BLAKE2b-256 |
6efe82542d4d93ac8d27f0e1e9d493d32094482683f05c54397a4c80d0a30771
|
File details
Details for the file pycirclize-0.1.0-py3-none-any.whl.
File metadata
- Download URL: pycirclize-0.1.0-py3-none-any.whl
- Upload date:
- Size: 37.7 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: poetry/1.3.1 CPython/3.9.16 Linux/5.15.0-1024-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
2d7f2cfcf964dfc5452e59a1c38e7af0e3f8a71f78675243b6c2c512d2e25955
|
|
| MD5 |
9b17d3ec658bb248984a31f4d711a5bd
|
|
| BLAKE2b-256 |
bb052bb16906ca03f9b62c19b4943df7bc9287fe099c77f08d2f6d1ca7584322
|
