Converts UniProt, HGNC, and Ensembl Transcript Ids to Entrez Gene Id
Project description
Converts Ensembl Transcript Gene ID to Entrez Gene Id
Example Code 1 - Converts Ensemble Transcript Gene Id to Entrez Gene Id::
from PyEntrezId import Conversion
EnsemblId = ‘ENST00000407559’ Id = Conversion() EntrezId = Id.convert_ensembl_to_entrez(EnsemblId) print(EntrezId) # Returns a String
Example Code 2 - Converts HGNC ID to Entrez Gene Id::
from PyEntrezId import Conversion
HGNCID = 9245 # hgncid ca be just the number or ‘HGNC:9425’ Id = Conversion() EntrezId = Id.convert_hgnc_to_entrez(HGNCID) print EntrezID # Returns a dictionary containing Symbol and Entrez Id
Example Code 3 - Converts Entrez Gene Id to Uniprot ID::
from PyEntrezId import Conversion
EntrezID = 39 Id = Conversion() UniProtId = Id.convert_entrez_to_uniprot(EntrezID) print UniProtId # Returns a string
Example Code 4 - Converts Uniprot Id to Entrez Gene Id::
from PyEntrezId import Conversion
UniProtId = ‘Q9BWD1’ Id = Conversion() EntrezID = Id.convert_uniprot_to_entrez(UniProtId) print EntrezID # Returns a string
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.