pyKVFinder
A Python package for detecting and characterizing biomolecular cavities.
See also:
Installation
To install the latest release on PyPI, run:
pip install pyKVFinder
Or to install the latest developmental version, run:
git clone https://github.com/LBC-LNBio/pyKVFinder.git
pip install -e pyKVFinder
Citation
If you use pyKVFinder package, please cite:
Guerra, J. V. S., Ribeiro-Filho, H. V., Jara, G. E., Bortot, L. O., Pereira, J. G. C., & Lopes-de-Oliveira, P. S. (2021). pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science. BMC bioinformatics, 22(1), 607. https://doi.org/10.1186/s12859-021-04519-4.
If you use pyKVFinder.Molecule, please also cite:
Guerra, J. V. S., Alves, L. F. G., Bourissou, D., Lopes-de-Oliveira, P. S., & Szalóki, G. (2023). Cavity Characterization in Supramolecular Cages. Journal of chemical information and modeling, 63(12), 3772-3785. https://doi.org/10.1021/acs.jcim.3c00328.
If you use PyMOL pyKVFinder Tools, please also cite:
Guerra, J. V. da S., Ribeiro Filho, H. V., Bortot, L. O., Honorato, R. V., Pereira, J. G. de C., & Lopes-de-Oliveira, P. S. (2020). ParKVFinder: A thread-level parallel approach in biomolecular cavity detection. In SoftwareX (Vol. 12, p. 100606). Elsevier BV. https://doi.org/10.1016/j.softx.2020.100606.
License
The software is licensed under the terms of the GNU General Public License version 3 (GPL3) and is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
1 maintainer
Release files for pyKVFinder 0.9.5
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| pykvfinder-0.9.5.tar.gz | 216.7 kB | Details |
Built distributions (wheels)
Total release size: 23.2 MB
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Release files / pykvfinder-0.9.5-cp314-cp314-musllinux_1_2_x86_64.whl
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No |
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twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp311-cp311-win_amd64.whl
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No |
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twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp311-cp311-musllinux_1_2_x86_64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-musllinux_1_2_x86_64.whl |
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| Size | 701.4 kB |
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No |
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Release files / pykvfinder-0.9.5-cp311-cp311-musllinux_1_2_aarch64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-musllinux_1_2_aarch64.whl |
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| Size | 708.5 kB |
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Release files / pykvfinder-0.9.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl |
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No |
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Release files / pykvfinder-0.9.5-cp311-cp311-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl |
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No |
| Uploaded via |
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Release files / pykvfinder-0.9.5-cp311-cp311-macosx_26_0_arm64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-macosx_26_0_arm64.whl |
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No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp311-cp311-macosx_15_0_x86_64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-macosx_15_0_x86_64.whl |
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No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp311-cp311-macosx_15_0_arm64.whl
| Download URL | pykvfinder-0.9.5-cp311-cp311-macosx_15_0_arm64.whl |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-win_amd64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-win_amd64.whl |
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| Size | 265.1 kB |
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No |
| Uploaded via |
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Release files / pykvfinder-0.9.5-cp310-cp310-musllinux_1_2_x86_64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-musllinux_1_2_x86_64.whl |
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No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-musllinux_1_2_aarch64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-musllinux_1_2_aarch64.whl |
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| Size | 697.8 kB |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl |
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| Size | 664.5 kB |
| Tags | CPython 3.10 Linux glibc 2.17+ x86-64 Linux glibc 2.28+ x86-64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-manylinux2014_aarch64.manylinux_2_17_aarch64.manylinux_2_28_aarch64.whl |
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| Size | 666.3 kB |
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No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-macosx_26_0_arm64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-macosx_26_0_arm64.whl |
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| Size | 509.4 kB |
| Tags | CPython 3.10 macOS 26.0+ ARM64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-macosx_15_0_x86_64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-macosx_15_0_x86_64.whl |
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| Size | 545.7 kB |
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SHA-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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Release files / pykvfinder-0.9.5-cp310-cp310-macosx_15_0_arm64.whl
| Download URL | pykvfinder-0.9.5-cp310-cp310-macosx_15_0_arm64.whl |
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| Size | 509.1 kB |
| Tags | CPython 3.10 macOS 15.0+ ARM64 |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.13.14
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