A Python ABIF reader
Project description
A Python ABIF (Applied Biosystems Genetic Analysis Data File Format) reader.
no external dependencies
minimal pythonification
ABIF is a directory of items, where every item is identified by unique name and number.
pyABIF is a class with attributes corresponding to name/number items:
>>> from pyabif import pyABIF
>>> abif = pyABIF('abif.fsa')
>>> abif.User1
joe
>>> abif.DATA1
pyabif can be used as a console script:
$ pyabif abif.fsa
Converted to txt
$ ls abif
abif.fsa
abif.fsa.csv.zipRelease history Release notifications | RSS feed
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