Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
Project description
pyannotables
Python package for conversions between Ensembl IDs and gene names (annotables + pyranges + Ensembl GTF files)
Free software: Apache Software License 2.0
Installation
pip install pyannotables
Features
Building data frames
See ./build.ipynb.
Changelog
v0.5: Homology mapping table and function (homology_convert) are added. tables is a function now.
v0.4: Entrez and UNIPROT IDs are added.
v0.3: Ensembl version updated to 100. NCBI transcript IDs, gene lengths and gene exon lengths are added.
Credits
annotables package in R https://github.com/stephenturner/annotables
audreyr/cookiecutter-pypackage: https://github.com/audreyr/cookiecutter-pypackage
History
v0.5 (2020-10-29)
Homology mapping table and function (homology_convert) are added.
tables is now a function.
v0.4 (2020-10-27)
Entrez and UNIPROT IDs are added.
v0.3 (2020-06-04)
Ensembl version updated to 100. NCBI transcript IDs, gene lengths and gene exon lengths are added.
v0.1 (2019-04-07)
First release on PyPI.
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for pyannotables-0.5-py2.py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | f852a6e14e0d7adf79e5aa90ceff537d0379a5ea489fbc6a61fc790ed37ba825 |
|
MD5 | 8ed9996ce60593d6ee3b562a4586f67a |
|
BLAKE2b-256 | 99744d05e849ff2521c66aa4348016e48413fae90b73859ad55c0c24994b0199 |