Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
Project description
pyannotables
Python package for conversions between Ensembl IDs and gene names (annotables + pyranges + Ensembl GTF files)
Free software: Apache Software License 2.0
Installation
pip install pyannotables
Features
Building data frames
See ./build.ipynb.
Changelog
v0.3: Ensembl version updated to 100. NCBI transcript IDs, gene lengths and gene exon lengths are added.
Credits
annotables package in R https://github.com/stephenturner/annotables
audreyr/cookiecutter-pypackage: https://github.com/audreyr/cookiecutter-pypackage
History
0.1.0 (2019-04-07)
First release on PyPI.
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
pyannotables-0.3.tar.gz
(18.5 MB
view hashes)
Built Distribution
Close
Hashes for pyannotables-0.3-py2.py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 82a1ea0f47ca20c37e40b44fc693b3596dbb1282ff351fd6e95b7fd14e94d8a4 |
|
MD5 | 93847de14030ce134bcfdb0c0e54cdd8 |
|
BLAKE2b-256 | fb7e2c8cd6f871d83f9ca9934c33740ce640093b8203f6c6fb06151f66a16ffd |