PyBioLib

PyBioLib is a Python package for running BioLib applications from Python scripts and the command line.

Python Example

# pip3 install -U pybiolib
import biolib
samtools = biolib.load('samtools/samtools')
print(samtools.cli(args='--help'))

Command Line Example

pip3 install -U pybiolib
biolib run samtools/samtools --help

Project links

Key dates

PyPI data
Data sourced directly from PyPI's database.
  • Released:
Latest release

2 maintainers

PyPI data
Data sourced directly from PyPI's database.
Avatar for biolib from gravatar.com biolib Avatar for mads-br from gravatar.com mads-br

Credits

Author: biolib

License expression

MIT
View SPDX License List

Requires

Python >=3.6.3

Provides Extra

sdk

Tags

biolib

Classifiers

Report project as malware

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

pybiolib-1.4.358.tar.gz (114.6 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

pybiolib-1.4.358-py3-none-any.whl (167.4 kB view details)

Uploaded Python 3

File details

Details for the file pybiolib-1.4.358.tar.gz.

File metadata

  • Download URL: pybiolib-1.4.358.tar.gz
  • Upload date:
  • Size: 114.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/7.0.0 CPython/3.13.14

File hashes

Hashes for pybiolib-1.4.358.tar.gz
Algorithm Hash digest
SHA256 2bec9f2b414f338be12965bef91e3607075458c5eecee9db19508ad2521ea390
MD5 28d055366b3f13baa7e59531953e5143
BLAKE2b-256 a51be8d89abc8c5d9d9d2e87100c51c25e35ccfc11443ffc6876ea85d68142d6

See more details on using hashes here.

Provenance

The following attestation bundles were made for pybiolib-1.4.358.tar.gz:

Publisher: ci_cd_v1.4.x.yml on biolibtech/biolib-client

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file pybiolib-1.4.358-py3-none-any.whl.

File metadata

  • Download URL: pybiolib-1.4.358-py3-none-any.whl
  • Upload date:
  • Size: 167.4 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/7.0.0 CPython/3.13.14

File hashes

Hashes for pybiolib-1.4.358-py3-none-any.whl
Algorithm Hash digest
SHA256 f5e49e29f09f2d0bb3699a47773013b4e459277529f220eaf77c69e18b3a6a9c
MD5 d19b84e4ce2e6d59b8390966b665f76b
BLAKE2b-256 974479b2b0484f1c99effa33ddfd4cb7288b24ffd50a35a50ed18cdd644dfc72

See more details on using hashes here.

Provenance

The following attestation bundles were made for pybiolib-1.4.358-py3-none-any.whl:

Publisher: ci_cd_v1.4.x.yml on biolibtech/biolib-client

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Release history Release notifications | RSS feed

This release

1.4.358

1.4.354

1.4.346

1.4.343

1.4.335

1.4.326

1.4.321

1.4.317

1.4.314

1.4.312

1.4.310

1.4.302

1.4.293

1.4.290

1.4.287

1.4.274

1.4.271

1.4.269

1.4.266

1.4.262

1.4.260

1.4.254

1.4.242

1.4.241

1.4.233

1.4.229

1.4.224

1.4.215

1.4.197

1.4.184

1.4.181

1.4.173

1.4.169

1.4.160

1.4.158

1.4.157

1.4.151

1.4.148

1.4.132

1.4.126

1.4.121

1.4.36

1.4.27

1.4.25

1.4.20

1.4.8

1.4.7

1.4.2

1.3.537

1.3.535

1.3.533

1.3.525

1.3.521

1.3.513

1.3.504

1.3.498

1.3.491

1.3.489

1.3.487

1.3.483

1.3.472

1.3.466

1.3.457

1.3.451

1.3.449

1.3.447

1.3.441

1.3.427

1.3.425

1.3.418

1.3.414

1.3.410

1.3.408

1.3.404

1.3.401

1.3.400

1.3.393

1.3.387

1.3.381

1.3.380

1.3.377

1.3.368

1.3.366

1.3.357

1.3.346

1.3.301

1.3.279

1.3.277

1.3.275

1.3.267

1.3.263

1.3.261

1.3.258

1.3.255

1.3.240

1.3.236

1.3.216

1.3.206

1.3.192

1.3.186

1.3.177

1.3.175

1.3.171

1.3.165

1.3.163

1.3.153

1.3.147

1.3.145

1.3.141

1.3.139

1.3.135

1.3.126

1.3.117

1.3.81

1.3.80

1.3.61

1.3.47

1.3.39

1.3.37

1.3.34

1.3.32

1.3.27

1.3.23

1.3.2

1.2.1892

1.2.1890

1.2.1888

1.2.1882

1.2.1879

1.2.1873

1.2.1870

1.2.1865

1.2.1863

1.2.1848

1.2.1797

1.2.1791

1.2.1788

1.2.1785

1.2.1782

1.2.1775

1.2.1768

1.2.1766

1.2.1765

1.2.1743

1.2.1739

1.2.1732

1.2.1731

1.2.1728

1.2.1727

1.2.1726

1.2.1720

1.2.1711

1.2.1709

1.2.1702

1.2.1696

1.2.1694

1.2.1690

1.2.1675

1.2.1673

1.2.1644

1.2.1642

1.2.1640

1.2.1635

1.2.1630

1.2.1626

1.2.1621

1.2.1602

1.2.1597

1.2.1594

1.2.1589

1.2.1576

1.2.1567

1.2.1564

1.2.1560

1.2.1557

1.2.1542

1.2.1540

1.2.1538

1.2.1531

1.2.1527

1.2.1520

1.2.1507

1.2.1502

1.2.1460

1.2.1455

1.2.1421

1.2.1420

1.2.1414

1.2.1389

1.2.1379

1.2.1361

1.2.1352

1.2.1337

1.2.1318

1.2.1310

1.2.1308

1.2.1304

1.2.1298

1.2.1295

1.2.1293

1.2.1247

1.2.1242

1.2.1240

1.2.1235

1.2.1232

1.2.1228

1.2.1187

1.2.1180

1.2.1175

1.2.1173

1.2.1168

1.2.1166

1.2.1164

1.2.1162

1.2.1153

1.2.1151

1.2.1144

1.2.1139

1.2.1135

1.2.1133

1.2.1126

1.2.1121

1.2.1117

1.2.1113

1.2.1111

1.2.1094

1.2.1077

1.2.1074

1.2.1072

1.2.1056

1.2.1053

1.2.1045

1.2.1040

1.2.1036.dev1 pre-release

1.2.1034

1.2.1030

1.2.1027

1.2.1022

1.2.1018

1.2.1007

1.2.998

1.2.985

1.2.983

1.2.980

1.2.978

1.2.975

1.2.947

1.2.946

1.2.944

1.2.942

1.2.939

1.2.931

1.2.923

1.2.918

1.2.911

1.2.910

1.2.909

1.2.908

1.2.907

1.2.906

1.2.904

1.2.902

1.2.897

1.2.888

1.2.883

1.2.878

1.2.876

1.2.874

1.2.871

1.2.869

1.2.856

1.2.849

1.2.846

1.2.841

1.2.838

1.2.814

1.2.802

1.2.796

1.2.783

1.2.772

1.2.770

1.2.766

1.2.760

1.2.749

1.2.744

1.2.740

1.2.735

1.2.720

1.2.716

1.2.713

1.2.701

1.2.698

1.2.695

1.2.686

1.2.679

1.2.678

1.2.676

1.2.659

1.2.633

1.2.611

1.2.602

1.2.600

1.2.589

1.2.582

1.2.576

1.2.567

1.2.565

1.2.561

1.2.558

1.2.520

1.2.517

1.2.515

1.2.503

1.2.502

1.2.500

1.2.497

1.2.494

1.2.465.dev1 pre-release

1.2.464

1.2.445

1.2.437

1.2.435

1.2.409.dev1 pre-release

1.2.408

1.2.406

1.2.366

1.2.347

1.2.346.dev1 pre-release

1.2.342.dev1 pre-release

1.2.340.dev1 pre-release

1.2.339

1.2.334.dev1 pre-release

1.2.328.dev1 pre-release

1.2.322.dev1 pre-release

1.2.309.dev1 pre-release

1.2.308.dev1 pre-release

1.2.298

1.2.270

1.2.264

1.2.261

1.2.257

1.2.252

1.2.249

1.2.243

1.2.230

1.2.223

1.2.221

1.2.218

1.2.216

1.2.211

1.2.209

1.2.205

1.2.197

1.2.196.dev1 pre-release

1.2.193.dev1 pre-release

1.2.191.dev1 pre-release

1.2.188

1.2.187.dev1 pre-release

1.2.185

1.2.184.dev1 pre-release

1.2.183.dev1 pre-release

1.2.181

1.2.180.dev1 pre-release

1.2.174

1.2.173.dev1 pre-release

1.2.166

1.2.165.dev1 pre-release

1.2.164.dev1 pre-release

1.2.163.dev1 pre-release

1.2.158.dev1 pre-release

1.2.152.dev1 pre-release

1.2.144.dev1 pre-release

1.2.142

1.2.141.dev1 pre-release

1.2.138.dev1 pre-release

1.2.122

1.2.121.dev1 pre-release

1.2.116.dev1 pre-release

1.2.115.dev1 pre-release

1.2.111

1.2.110.dev1 pre-release

1.2.108

1.2.106.dev1 pre-release

1.2.105.dev1 pre-release

1.2.102.dev1 pre-release

1.2.101.dev1 pre-release

1.2.100.dev1 pre-release

1.2.99.dev1 pre-release

1.2.98.dev1 pre-release

1.2.71

1.2.63.dev1 pre-release

1.2.60.dev1 pre-release

1.2.52.dev1 pre-release

1.2.50

1.2.49.dev1 pre-release

1.2.48.dev1 pre-release

1.2.47

1.2.46.dev1 pre-release

1.2.39.dev1 pre-release

1.2.31

1.2.30.dev1 pre-release

1.2.29.dev1 pre-release

1.2.19.dev1 pre-release

1.2.16

1.2.15.dev1 pre-release

1.2.14.dev1 pre-release

1.2.12

1.2.11.dev1 pre-release

1.2.10.dev1 pre-release

1.2.7.dev0 pre-release

1.2.6.dev0 pre-release

1.1.2250

1.1.2244

1.1.2236

1.1.2234

1.1.2232

1.1.2229

1.1.2226

1.1.2224

1.1.2218

1.1.2216

1.1.2208

1.1.2204

1.1.2199

1.1.2195

1.1.2193

1.1.2191

1.1.2189

1.1.2184

1.1.2180

1.1.2175

1.1.2173

1.1.2171

1.1.2169

1.1.2155

1.1.2153

1.1.2145

1.1.2141

1.1.2138

1.1.2135

1.1.2133

1.1.2123

1.1.2119

1.1.2112

1.1.2109

1.1.2097

1.1.2090

1.1.2038

1.1.2036

1.1.2031

1.1.2025

1.1.2023

1.1.2017

1.1.2013

1.1.2011

1.1.2004

1.1.2003

1.1.1998

1.1.1995

1.1.1990

1.1.1988

1.1.1986

1.1.1984

1.1.1979

1.1.1974

1.1.1971

1.1.1957

1.1.1942

1.1.1934

1.1.1930

1.1.1928

1.1.1926

1.1.1923

1.1.1921

1.1.1917

1.1.1909

1.1.1907

1.1.1896

1.1.1892

1.1.1890

1.1.1881

1.1.1879

1.1.1874

1.1.1866

1.1.1855

1.1.1846

1.1.1836

1.1.1834

1.1.1830

1.1.1828

1.1.1815

1.1.1810

1.1.1803

1.1.1794

1.1.1786

1.1.1782

1.1.1780

1.1.1777

1.1.1774

1.1.1769

1.1.1755

1.1.1753

1.1.1749

1.1.1747

1.1.1745

1.1.1741

1.1.1739

1.1.1734

1.1.1730

1.1.1718

1.1.1711

1.1.1708

1.1.1703

1.1.1691

1.1.1689

1.1.1687

1.1.1685

1.1.1682

1.1.1673

1.1.1666

1.1.1664

1.1.1662

1.1.1660

1.1.1651

1.1.1648

1.1.1644

1.1.1641

1.1.1632

1.1.1629

1.1.1626

1.1.1608

1.1.1598

1.1.1596

1.1.1583

1.1.1571

1.1.1569

1.1.1566

1.1.1564

1.1.1558

1.1.1542

1.1.1535

1.1.1533

1.1.1530

1.1.1527

1.1.1525

1.1.1518

1.1.1514

1.1.1512

1.1.1508

1.1.1505

1.1.1502

1.1.1499

1.1.1497

1.1.1495

1.1.1483

1.1.1480

1.1.1478

1.1.1476

1.1.1474

1.1.1472

1.1.1467

1.1.1465

1.1.1455

1.1.1453

1.1.1445

1.1.1440

1.1.1437

1.1.1423

1.1.1420

1.1.1418

1.1.1412

1.1.1402

1.1.1395

1.1.1393

1.1.1387

1.1.1382

1.1.1379

1.1.1377

1.1.1374

1.1.1367

1.1.1365

1.1.1360

1.1.1358

1.1.1355

1.1.1350

1.1.1342

1.1.1340

1.1.1338

1.1.1336

1.1.1325

1.1.1316

1.1.1310

1.1.1306

1.1.1301

1.1.1297

1.1.1296

1.1.1282

1.1.1277

1.1.1274

1.1.1272

1.1.1269

1.1.1264

1.1.1225

1.1.1218

1.1.1216

1.1.1212

1.1.1209

1.1.1207

1.1.1205

1.1.1200

1.1.1198

1.1.1196

1.1.1194

1.1.1188

1.1.1185

1.1.1183

1.1.1180

1.1.1172

1.1.1167

1.1.1151

1.1.1150

1.1.1149

1.1.1146

1.1.1125

1.1.1121

1.1.1117

1.1.1111

1.1.1108

1.1.1101

1.1.1099

1.1.1097

1.1.1095

1.1.1093

1.1.1084

1.1.1073

1.1.1071

1.1.1065

1.1.1044

1.1.1029

1.1.1027

1.1.1025

1.1.1011

1.1.1007

1.1.1003

1.1.999

1.1.997

1.1.995

1.1.988

1.1.976

1.1.974

1.1.971

1.1.968

1.1.944

1.1.940

1.1.930

1.1.929

1.1.928

1.1.926

1.1.924

1.1.918

1.1.916

1.1.911

1.1.908

1.1.892

1.1.862

1.1.860

1.1.859

1.1.856

1.1.846

1.1.844

1.1.842

1.1.838

1.1.836

1.1.835

1.1.834

1.1.833

1.1.831

1.1.830

1.1.828

1.1.825

1.1.824

1.1.822

1.1.814

1.1.809

1.1.807

1.1.801

1.1.791

1.1.785

1.1.781

1.1.775

1.1.770

1.1.767

1.1.763

1.1.761

1.1.755

1.1.754

1.1.752

1.1.751

1.1.743

1.1.742

1.1.739

1.1.732

1.1.700

1.1.699

1.1.693

1.1.691

1.1.688

1.1.685

1.1.680

1.1.676

1.1.675

1.1.673

1.1.670

1.1.663

1.1.654

1.1.638

1.1.635

1.1.632

1.1.623

1.1.618

1.1.608

1.1.603

1.1.600

1.1.578

1.1.555

1.1.550

1.1.537

1.1.528

1.1.519

1.1.511

1.1.510

1.1.506

1.1.504

1.1.466

1.1.450

1.1.435

1.1.422

1.1.361

1.1.332

1.1.330

1.1.326

1.1.304

1.1.301

1.1.296

1.1.293

1.1.291

1.1.286

1.1.268

1.1.249

1.1.244

1.1.241

1.1.238

1.1.235

1.1.232

1.1.215

1.1.213

1.1.207

1.1.205

1.1.190

1.1.185

1.1.183

1.1.181

1.1.179

1.1.177

1.1.170

1.1.168

1.1.164

1.1.162

1.1.158

1.1.156

1.1.153

1.1.151

1.1.147

1.1.145

1.1.142

1.1.140

1.1.136

1.1.134

1.1.132

1.1.128

1.1.126

1.1.122

1.1.120

1.1.115

1.1.113

1.1.108

1.1.105

1.1.103

1.1.94

1.1.91

1.1.88

1.1.86

1.1.83

1.1.81

1.1.77

1.1.73

1.1.68

1.1.64

1.1.62

1.1.57

1.1.55

1.1.54

1.1.53

1.1.51

1.1.49

1.1.45

1.1.31

1.1.30

1.1.29

1.1.6

1.1.1

1.0.1909

1.0.1892

1.0.1883

1.0.1881

1.0.1878

1.0.1874

1.0.1869

1.0.1863

1.0.1843

1.0.1836

1.0.1825

1.0.1820

1.0.1814

1.0.1812

1.0.1809

1.0.1806

1.0.1798

1.0.1765

1.0.1762

1.0.1758

1.0.1756

1.0.1748

1.0.1742

1.0.1738

1.0.1733

1.0.1728

1.0.1723

1.0.1720

1.0.1717

1.0.1705

1.0.1704

1.0.1700

0.2.1698

0.2.1696

0.2.1694

0.2.1690

0.2.1684

0.2.1680

0.2.1678

0.2.1673

0.2.1648

0.2.1640

0.2.1627

0.2.1624

0.2.1613

0.2.1604

0.2.1591

0.2.1587

0.2.1586

0.2.1577

0.2.1575

0.2.1571

0.2.1564

0.2.1560

0.2.1534

0.2.1531

0.2.1529

0.2.1523

0.2.1520

0.2.1512

0.2.1509

0.2.1507

0.2.1503

0.2.1499

0.2.1493

0.2.1490

0.2.1479

0.2.1477

0.2.1462

0.2.1457

0.2.1443

0.2.1440

0.2.1437

0.2.1435

0.2.1429

0.2.1370

0.2.1367

0.2.1356

0.2.1351

0.2.1345

0.2.1344

0.2.1341

0.2.1336

0.2.1332

0.2.1329

0.2.1328

0.2.1324

0.2.1321

0.2.1318

0.2.1315

0.2.1313

0.2.1310

0.2.1308

0.2.1298

0.2.1288

0.2.1285

0.2.1282

0.2.1278

0.2.1274

0.2.1272

0.2.1269

0.2.1265

0.2.1255

0.2.1250

0.2.1248

0.2.1240

0.2.1239

0.2.1236

0.2.1230

0.2.1226

0.2.1221

0.2.1216

0.2.1211

0.2.1208

0.2.1206

0.2.1203

0.2.1200

0.2.1194

0.2.1182

0.2.1180

0.2.1177

0.2.1175

0.2.1167

0.2.1164

0.2.1162

0.2.1154

0.2.1151

0.2.1149

0.2.1144

0.2.1140

0.2.1138

0.2.1136

0.2.1125

0.2.1123

0.2.1121

0.2.1118

0.2.1116

0.2.1111

0.2.1109

0.2.1103

0.2.1098

0.2.1092

0.2.1090

0.2.1087

0.2.1084

0.2.1080

0.2.1071

0.2.1067

0.2.1061

0.2.1046

0.2.1043

0.2.1025

0.2.991

0.2.983

0.2.964

0.2.962

0.2.959

0.2.953

0.2.951

0.2.947

0.2.943

0.2.937

0.2.902

0.2.898

0.2.896

0.2.881

0.2.875

0.2.872

0.2.869

0.2.862

0.2.852

0.2.836

0.2.834

0.2.826

0.2.820

0.2.817

0.2.813

0.2.789

0.2.787

0.2.782

0.2.756

0.2.747

0.2.746

0.2.744

0.2.733

0.2.717

0.2.702

0.2.696

0.2.687

0.2.685

0.2.669

0.2.652

0.2.650

0.2.623

0.2.619

0.2.604

0.2.600

0.2.580

0.2.577

0.2.560

0.2.542

0.2.539

0.2.536

0.2.514

0.2.512

0.2.511

0.2.464

0.2.458

0.2.452

0.2.448

0.2.442

0.2.440

0.2.436

0.2.419

0.2.417

0.2.415

0.2.410

0.2.383

0.2.377

0.2.367

0.2.354

0.2.343

0.2.340

0.2.308

0.2.306

0.2.301

0.2.294

0.2.278

0.2.270

0.2.264

0.2.261

0.2.250

0.2.240

0.2.217

0.2.193

0.2.191

0.2.189

0.2.187

0.2.184

0.2.181

0.2.177

0.2.173

0.2.162

0.2.160

0.2.157

0.2.151

0.2.144

0.2.142

0.2.138

0.2.136

0.2.132

0.2.130

0.2.128

0.2.123

0.2.119

0.2.116

0.2.114

0.2.108

0.2.105

0.2.100

0.2.96

0.2.94

0.2.91

0.2.88

0.2.86

0.2.81

0.2.78

0.2.73

0.2.72

0.2.45

0.2.20

0.2.17

0.1.744

0.1.743

0.1.742

0.1.741

0.1.740

0.1.739

0.1.738

0.1.737

0.1.736

0.1.735

0.1.734

0.1.733

0.1.732

0.1.731

0.1.730

0.1.729

0.1.728

0.1.727

0.1.726

0.1.725

0.1.724

0.1.723

0.1.722

0.1.721

0.1.720

0.1.719

0.1.709

0.1.542

0.1.275

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page