Skip to main content

PyCap: Python interface to REDCap

Project description

https://secure.travis-ci.org/sburns/PyCap.png?branch=master

Intro

PyCap is a python module exposing the REDCap API through some helpful abstractions. Information about the REDCap project can be found at http://project-redcap.org/.

Available under the BSD (3-clause) license.

Features

Currently, these API calls are available:

  • Export Records

  • Export Metadata

  • Import Records

Events and Arms are automatically exported for longitudinal projects (see below).

Requirements

  • requests (> 0.6.4)

    $ easy_install requests

Usage

>>> import redcap
# Init the project with the api url and your specific api key
>>> project = redcap.Project(api_url, api_key)

# Export all data
>>> all_data = project.export_records()

# import data
>>> data = [{'subjid': i, 'age':a} for i, a in zip(range(1,6), range(7, 13))]
>>> num_processed = project.import_records(data)

# For longitudinal projects, project already contains events, arm numbers
# and arm names
>>> print project.events
...
>>> print project.arm_nums
...
>>> print project.arm_names
...

Installation

$ git clone git://github.com/sburns/PyCap.git PyCap
$ cd PyCap
$ python setup.py install

OR

$ pip install PyCap

TODO

  • More Tests

  • File export and import

HISTORY

0.5 (2012-09-19)

  • Add initial support for longitudinal databases

  • Add helper attributes on redcap.Project class

  • Improve testing

  • Add Travis-CI testing on github

0.4.2 (2012-03-15)

  • 0.4.1 didn’t play well with pypi?

0.4.1 (2012-03-15)

  • Defend against non-unicode characters in Redcap Project

0.3.4 (2012-01-12)

  • New documentation

0.3.3 (2011-11-21)

  • Bug fix when exporting all fields

0.3.2 (2011-11-21)

  • Works with current version of requests

  • Under-the-hood changes (only json is used for RCRequest)

  • Bug fix in Project.filter

0.3.1 (2011-11-02)

  • Bug fix in import_records

0.3 (2011-09-27)

  • Using Kenneth Reitz’s request module, greatly simplifying request code.

0.21 (2011-09-14)

  • First public release on PyPI

  • Version bump

0.1 (2011-09-14)

  • Basic import, export, metadata

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

PyCap-0.5.tar.gz (10.3 kB view details)

Uploaded Source

File details

Details for the file PyCap-0.5.tar.gz.

File metadata

  • Download URL: PyCap-0.5.tar.gz
  • Upload date:
  • Size: 10.3 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No

File hashes

Hashes for PyCap-0.5.tar.gz
Algorithm Hash digest
SHA256 dbc39d5c714ae13cc23e6ef60d79a7dc7e642ab4a3fec13d94ba84622789a0a8
MD5 c152ef11d30e86d5c09e4d4d0846b069
BLAKE2b-256 f7e68ed2acb81c06d5863fcfc2280cbffd3dfecc3af3a66f5091da30dffe106b

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page